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FAM134C

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:15.4TPM
GTEx:12.8RPKM
FANTOM5:42.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA016492

  

Endothelial cells

 High  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

15.4
overview Male, age 54
Sample 1
TPM: 18.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57
Sample 2
TPM: 13.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80
Sample 3
TPM: 11.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68
Sample 4
TPM: 17.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68
Sample 5
TPM: 10.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61
Sample 6
TPM: 15.0
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80
Sample 7
TPM: 17.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78
Sample 8
TPM: 13.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84
Sample 9
TPM: 16.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80
Sample 10
TPM: 15.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78
Sample 11
TPM: 19.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69
Sample 12
TPM: 17.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72
Sample 13
TPM: 14.0
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

12.8

GTEx sample id

RPKM
 

Colon - Sigmoid
Colon - Sigmoid
RPKM: 12.9
Samples: 149

Max RPKM: 21.1
Min RPKM: 6.3
Std RPKM: 2.9
Median RPKM: 12.8
GTEX-1477Z-2126-SM-5Q5CM 21.1
GTEX-ZVT4-2626-SM-5N9GJ 19.8
GTEX-146FH-2426-SM-5Q5EW 19.4
GTEX-14A5I-2426-SM-5Q5CP 19.3
GTEX-12WSM-1426-SM-5GCPA 19.2
GTEX-139TS-2226-SM-5J2N1 18.9
GTEX-145MO-2626-SM-5QGPD 18.4
GTEX-13N2G-2226-SM-5IJCU 18.2
Show all
 

Colon - Transverse
Colon - Transverse
RPKM: 12.7
Samples: 196

Max RPKM: 19.4
Min RPKM: 4.5
Std RPKM: 2.3
Median RPKM: 12.8
GTEX-Y5LM-1526-SM-4VDTA 19.4
GTEX-U3ZH-1326-SM-4DXSF 19.1
GTEX-R55C-1126-SM-48FCJ 18.7
GTEX-145MO-2426-SM-5NQ9W 17.3
GTEX-13O21-2426-SM-5MR4A 17.0
GTEX-147F3-1926-SM-5SIB9 16.9
GTEX-132AR-2726-SM-5PNVN 16.5
GTEX-OXRK-1726-SM-3NB16 16.5
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

42.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 42.7
FF:10014-101C5 62,83,84 years, mixed 42.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.