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SH3GL1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:35.4TPM
GTEx:30.4RPKM
FANTOM5:36.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA021485

  

Adipocytes

 Not detected  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Medium
 
 

Antibody staining

Antibody HPA021485

  

Adipocytes

 Not detected  

Fibroblasts

 Medium  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

35.4
N/A Female, age 80
Sample 1
TPM: 55.0
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 20.7
N/A Female, age 57
Sample 3
TPM: 20.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 41.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 39.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

30.4

GTEx sample id

RPKM
27.331.937.117.451.5051015202530354045505560
 
27.331.937.117.451.5051015202530354045505560

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 32.6
Samples: 350

Max RPKM: 62.4
Min RPKM: 17.4
Std RPKM: 7.8
Median RPKM: 31.9
GTEX-X4XY-0326-SM-46MVZ 62.4
GTEX-ZYVF-0226-SM-5GIEG 62.2
GTEX-13O1R-0226-SM-5K7U5 59.4
GTEX-UJHI-1626-SM-3DB9A 56.7
GTEX-X8HC-0226-SM-4E3K1 52.8
GTEX-XYKS-2726-SM-4E3IC 52.7
GTEX-13OVI-1326-SM-5IJBO 52.6
GTEX-13OVJ-0326-SM-5L3GL 51.5
Show all
22.025.629.612.640.8051015202530354045505560
 
22.025.629.612.640.8051015202530354045505560

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 27.1
Samples: 227

Max RPKM: 60.1
Min RPKM: 12.6
Std RPKM: 7.5
Median RPKM: 25.6
GTEX-X8HC-2326-SM-4QAS4 60.1
GTEX-ZYVF-1026-SM-5E44V 55.6
GTEX-13OVH-1126-SM-5K7YP 54.6
GTEX-11WQK-1526-SM-5EGKN 52.9
GTEX-U8XE-1926-SM-3DB98 49.8
GTEX-1399S-1426-SM-5PNYQ 47.1
GTEX-1339X-0726-SM-5L3FF 46.7
GTEX-1128S-0926-SM-5GZZU 45.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

36.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 36.1
FF:10010-101C1 65,65,76 years, mixed 36.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.