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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:9.8RPKM
FANTOM5:28.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA021485

 

Glial cells

Low  

Neuronal cells

Not detected  
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

9.8

GTEx sample id

RPKM

8.410.011.24.914.60246810121416
 
8.410.011.24.914.60246810121416

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 9.8
Samples: 117

Max RPKM: 16
Min RPKM: 4.9
Std RPKM: 2.1
Median RPKM: 10
GTEX-WHSE-0011-R5A-SM-3P5ZO 16.0
GTEX-X585-0011-R5A-SM-46MVI 14.6
GTEX-139TT-0011-R5b-SM-5K7W8 14.2
GTEX-13JUV-0011-R5a-SM-5LZY5 13.4
GTEX-T5JC-0011-R5A-SM-32PLK 13.4
GTEX-132Q8-0011-R5a-SM-5IJDM 13.2
GTEX-13NYS-0011-R5a-SM-5MR4D 13.0
GTEX-14BIM-0011-R5b-SM-5S2RM 12.9
GTEX-13OW5-0011-R5b-SM-5L3FR 12.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 12.5
GTEX-13O3O-0011-R5b-SM-5KM44 12.3
GTEX-WL46-0011-R5A-SM-3LK6V 12.1
GTEX-WWYW-0011-R5A-SM-3NB3E 12.1
GTEX-13OW6-0011-R5a-SM-5O9BK 11.9
GTEX-13X6I-0011-R5a-SM-5PNWW 11.8
GTEX-X4XX-0011-R5A-SM-46MWN 11.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 11.7
GTEX-13SLX-0011-R5a-SM-5O9BV 11.6
GTEX-NL4W-0011-R5a-SM-2I3GD 11.6
GTEX-OHPN-0011-R5A-SM-2I5FF 11.6
GTEX-11GSP-0011-R5a-SM-57WBE 11.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 11.5
GTEX-T6MN-0011-R5A-SM-32QPD 11.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 11.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 11.4
GTEX-XMD1-0011-R5A-SM-4AT47 11.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 11.3
GTEX-145MH-0011-R5a-SM-5P9JT 11.3
GTEX-RVPV-0011-R5A-SM-2TF69 11.3
GTEX-13G51-0011-R5a-SM-5L3EB 11.2
GTEX-13NYB-0011-R5a-SM-5MR45 11.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 11.1
GTEX-12WSF-0011-R5a-SM-5HL8K 11.0
GTEX-13OVH-0011-R5b-SM-5KM4L 11.0
GTEX-13FLW-0011-R5a-SM-5LZX6 10.9
GTEX-13FXS-0011-R5b-SM-5LZYE 10.9
GTEX-RU72-0011-R5A-SM-2TF6U 10.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 10.8
GTEX-N7MS-0011-R5a-SM-2HMK8 10.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 10.8
GTEX-12WSC-0011-R5b-SM-5CVNS 10.7
GTEX-N7MT-0011-R5a-SM-2I3G6 10.7
GTEX-13FLV-0011-R5a-SM-5LZWT 10.6
GTEX-13CZV-0011-R5a-SM-5K7XA 10.5
GTEX-13S7M-0011-R5b-SM-5P9HS 10.5
GTEX-13VXU-0011-R5a-SM-5O9D7 10.5
GTEX-145LS-0011-R5a-SM-5SI65 10.4
GTEX-TSE9-0011-R5A-SM-3DB7J 10.4
GTEX-1399T-0011-R5b-SM-5IJDK 10.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 10.3
GTEX-13X6K-0011-R5b-SM-5PNUE 10.3
GTEX-WVLH-0011-R5A-SM-3MJFW 10.3
GTEX-WZTO-0011-R5B-SM-3NMC5 10.3
GTEX-13OW7-0011-R5b-SM-5O9DM 10.1
GTEX-12ZZX-0011-R5a-SM-5HL89 10.0
GTEX-131YS-0011-R5b-SM-5K7YB 10.0
GTEX-13OVL-0011-R5b-SM-5L3FU 10.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 10.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 10.0
GTEX-11OF3-0011-R5a-SM-57WB4 9.9
GTEX-14ABY-0011-R5b-SM-5SI7B 9.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 9.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 9.9
GTEX-13CIG-0011-R5b-SM-5L3F2 9.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 9.8
GTEX-QVJO-0011-R5A-SM-2S1QM 9.8
GTEX-ZUA1-0011-R5b-SM-51MTG 9.8
GTEX-11H98-0011-R5b-SM-57WCF 9.7
GTEX-Z93S-0011-R5b-SM-4RGNI 9.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 9.6
GTEX-13X6J-0011-R5b-SM-5PNWT 9.6
GTEX-XOTO-0011-R5A-SM-4B657 9.6
GTEX-1313W-0011-R5b-SM-5L3EP 9.5
GTEX-11NV4-0011-R5a-SM-5NQ88 9.4
GTEX-12WSD-0011-R5b-SM-5CVNG 9.4
GTEX-R55E-0011-R5A-SM-2TC5N 9.4
GTEX-12WSB-0011-R5b-SM-5GU67 9.3
GTEX-ZE7O-0011-R5a-SM-57WBO 9.3
GTEX-P44H-0011-R5A-SM-2XCEX 9.2
GTEX-13JVG-0011-R5a-SM-5MR4O 9.1
GTEX-S7SE-0011-R5A-SM-2XCDA 9.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 9.0
GTEX-144GO-0011-R5a-SM-5PNUR 9.0
GTEX-RVPU-0011-R5A-SM-2XCAD 8.8
GTEX-12WSA-0011-R5b-SM-5GU5I 8.7
GTEX-YJ89-0011-R5a-SM-4V6GM 8.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 8.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 8.4
GTEX-YFC4-0011-R5a-SM-4RGLR 8.4
GTEX-12WSH-0011-R5b-SM-5P9F3 8.2
GTEX-UTHO-0011-R5A-SM-3GIJD 8.0
GTEX-14BIN-0011-R5b-SM-5SI78 7.9
GTEX-139TS-0011-R5b-SM-5J2MZ 7.8
GTEX-ZXG5-0011-R5b-SM-57WBN 7.8
GTEX-X261-0011-R5A-SM-3NMB4 7.7
GTEX-11WQC-0011-R5a-SM-5BC74 7.5
GTEX-13112-0011-R5b-SM-5DUV8 7.5
GTEX-139T8-0011-R5b-SM-5J1MO 7.5
GTEX-QMR6-0011-R5A-SM-32PKT 7.5
GTEX-144GL-0011-R5b-SM-5PNUJ 7.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 7.3
GTEX-OXRN-0011-R5A-SM-2I5EF 7.3
GTEX-PVOW-0011-R5A-SM-32PL7 7.3
GTEX-NL3H-0011-R5a-SM-2I3GB 7.2
GTEX-ZVT3-0011-R5a-SM-51MSI 7.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 7.0
GTEX-13FHP-0011-R5b-SM-5LZY2 6.5
GTEX-1445S-0011-R5a-SM-5PNUS 6.3
GTEX-ZV68-0011-R5a-SM-4YCDW 6.3
GTEX-NPJ7-0011-R5a-SM-33HBK 6.1
GTEX-11UD1-0011-R5b-SM-5P9FP 5.8
GTEX-13CF2-0011-R5a-SM-5LZWS 5.6
GTEX-1477Z-0011-R5b-SM-5PNUO 5.6
GTEX-T2IS-0011-R5A-SM-32QP4 5.4
GTEX-13NZA-0011-R5b-SM-5KM4K 5.0
GTEX-S7PM-0011-R5A-SM-3NM8G 5.0
GTEX-145MG-0011-R5b-SM-5S2VU 4.9
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

28.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 28.3
FF:10164-103B2 76 years, female 32.9
FF:10379-105H1 89 years, female 23.6

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