Tissue expression of SH3GL1 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	52.3	TPM
GTEx:	18.2	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Medium
Glial cells:	Low
Neuronal cells:	Not detected
Neuropil:	Medium

Antibody staining	Antibody HPA021485
Endothelial cells	Medium
Glial cells	Low
Neuronal cells	Not detected
Neuropil	Medium

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	52.3

Male, age 5

Sample 1
TPM: 47.0

Female, age 40

Sample 2
TPM: 62.4

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 47.5

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	18.2

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 19.6

Samples: 114

Max RPKM: 29.8
Min RPKM: 9.7
Std RPKM: 3.6
Median RPKM: 19.7

GTEX-11OC5-0726-SM-5P9JK

29.8

GTEX-13O3O-3126-SM-5KM3H

28.5

GTEX-12126-1026-SM-5P9JJ

27.2

GTEX-13SLX-3126-SM-5S2Q5

26.2

GTEX-WHSE-3026-SM-3P5ZH

26.0

GTEX-T5JC-2426-SM-3NMDB

25.2

GTEX-X585-3026-SM-46MWF

24.9

GTEX-117XS-3026-SM-5N9CA

24.6

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 16.6

Samples: 108

Max RPKM: 40.1
Min RPKM: 8.2
Std RPKM: 4.3
Median RPKM: 16.5

GTEX-13QJC-0011-R10a-SM-5SI63

40.1

GTEX-13O3O-0011-R10a-SM-5LUA9

29.2

GTEX-X261-0011-R10B-SM-4E3JT

26.9

GTEX-X4EP-0011-R10B-SM-4QASJ

26.6

GTEX-13OW6-0011-R10a-SM-5L3HE

24.3

GTEX-13NYS-0011-R10a-SM-5MR4S

24.1

GTEX-13N1W-0011-R10b-SM-5MR4H

23.6

GTEX-13OW7-0011-R10a-SM-5L3H3

23.2

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue