We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SH3GL1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:13.6RPKM
FANTOM5:28.0Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA021485

 

Glial cells

Not detected  

Neuronal cells

Not detected  
 
 
 

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

13.6

GTEx sample id

RPKM

9.713.116.75.325.0024681012141618202224262830
 
9.713.116.75.325.0024681012141618202224262830

Brain - Hippocampus

Brain - Hippocampus
RPKM: 13.6
Samples: 94

Max RPKM: 30.8
Min RPKM: 5.3
Std RPKM: 4.8
Median RPKM: 13.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 30.8
GTEX-13O3O-0011-R1b-SM-5KM2K 25.0
GTEX-N7MS-0011-R1a-SM-2HMJG 22.9
GTEX-13OW7-0011-R1b-SM-5L3HF 22.4
GTEX-Y8DK-0011-R1A-SM-4RGLO 22.3
GTEX-13FXS-0011-R1a-SM-5K7U6 21.9
GTEX-13JUV-0011-R1a-SM-5LZY4 21.8
GTEX-131XH-0011-R1a-SM-5DUWA 21.3
GTEX-12WSE-0011-R1b-SM-5GU4V 21.2
GTEX-13X6I-0011-R1b-SM-5PNZC 20.9
GTEX-139TT-0011-R1a-SM-5LZVD 20.8
GTEX-13OW5-0011-R1b-SM-5L3GE 20.6
GTEX-T5JC-0011-R1A-SM-32PM6 20.5
GTEX-145MH-0011-R1b-SM-5PNWY 18.8
GTEX-WL46-0011-R1A-SM-3LK6M 18.6
GTEX-144GL-0011-R1a-SM-5PNZ5 18.3
GTEX-12WSD-0011-R1b-SM-5LZVY 17.8
GTEX-12WSM-0011-R1a-SM-5LZW6 17.7
GTEX-13N1W-0011-R1b-SM-5MR4T 17.5
GTEX-139T8-0011-R1a-SM-5HL75 17.4
GTEX-13NYS-0011-R1b-SM-5MR55 16.9
GTEX-YFC4-0011-R1a-SM-4V6EH 16.8
GTEX-S7SE-0011-R1A-SM-2XCDE 16.7
GTEX-NPJ7-0011-R1a-SM-3GACT 16.7
GTEX-P44H-0011-R1A-SM-3NM8J 16.6
GTEX-14ASI-0011-R1b-SM-5S2TY 16.4
GTEX-13G51-0011-R1a-SM-5LZYR 16.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 16.1
GTEX-13112-0011-R1b-SM-5HL7K 15.8
GTEX-13PDP-0011-R1a-SM-5PNX5 15.8
GTEX-WVLH-0011-R1A-SM-4MVOK 15.5
GTEX-WWYW-0011-R1A-SM-3TW8G 15.4
GTEX-N7MT-0011-R1a-SM-5SI7S 15.2
GTEX-RNOR-0011-R1A-SM-5SI8F 15.0
GTEX-X585-0011-R1B-SM-46MVE 14.9
GTEX-13SLW-0011-R1a-SM-5S2W7 14.9
GTEX-13OW6-0011-R1a-SM-5L3HQ 14.8
GTEX-X4XX-0011-R1B-SM-3P622 14.6
GTEX-13S7M-0011-R1b-SM-5PNZE 14.4
GTEX-13FLW-0011-R1b-SM-5LZX2 14.4
GTEX-11ONC-0011-R1a-SM-57WD4 14.2
GTEX-13QJC-0011-R1b-SM-5S2UU 13.9
GTEX-145LU-0011-R1a-SM-5Q5CE 13.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 13.5
GTEX-XOTO-0011-R1B-SM-4B65C 13.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 13.1
GTEX-R55E-0011-R1A-SM-2TC6N 13.1
GTEX-132Q8-0011-R1a-SM-5EGLK 13.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 12.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 12.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 12.4
GTEX-13OVL-0011-R1a-SM-5L3H5 12.4
GTEX-13N2G-0011-R1b-SM-5MR3G 12.3
GTEX-12WSH-0011-R1a-SM-5GU5V 12.2
GTEX-QVUS-0011-R1A-SM-3GAD2 11.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 11.6
GTEX-13FHO-0011-R1b-SM-5KLZG 11.4
GTEX-ZVZQ-0011-R1a-SM-57WBU 11.3
GTEX-131YS-0011-R1a-SM-5DUXC 11.3
GTEX-1399T-0011-R1b-SM-5DUWN 11.3
GTEX-WZTO-0011-R1B-SM-3NMAR 11.2
GTEX-TSE9-0011-R1A-SM-3DB7E 11.1
GTEX-PVOW-0011-R1A-SM-32PL6 10.9
GTEX-QVJO-0011-R1A-SM-2S1QI 10.7
GTEX-NL3H-0011-R1a-SM-48TDJ 10.7
GTEX-ZAB4-0011-R1a-SM-4RGNO 10.3
GTEX-13NYB-0011-R1b-SM-5KM4F 10.2
GTEX-145LS-0011-R1b-SM-5PNUP 10.1
GTEX-12WSF-0011-R1a-SM-5DUVI 9.9
GTEX-11GSO-0011-R1b-SM-57WD3 9.8
GTEX-13FTY-0011-R1a-SM-5LZXE 9.6
GTEX-1313W-0011-R1b-SM-5EQ4A 9.5
GTEX-XMD1-0011-R1A-SM-4AT4C 9.5
GTEX-144GO-0011-R1a-SM-5PNWO 9.5
GTEX-13JVG-0011-R1a-SM-5KM32 9.2
GTEX-12WSB-0011-R1b-SM-5P9EY 9.2
GTEX-YJ89-0011-R1a-SM-4RGLS 9.1
GTEX-UTHO-0011-R1A-SM-3GIJO 8.9
GTEX-13CF2-0011-R1a-SM-5LZY1 8.9
GTEX-ZUA1-0011-R1a-SM-4YCE2 8.7
GTEX-11UD1-0011-R1b-SM-5BC7D 8.4
GTEX-QDT8-0011-R1A-SM-32PKS 8.3
GTEX-T6MN-0011-R1A-SM-32QOY 8.2
GTEX-PWO3-0011-R1A-SM-2I5EW 8.2
GTEX-13NZA-0011-R1b-SM-5LUAF 7.6
GTEX-1212Z-0011-R1b-SM-5BC72 7.5
GTEX-ZF28-0011-R1a-SM-4WWD1 7.5
GTEX-QMR6-0011-R1A-SM-32PKW 7.3
GTEX-13OW8-0011-R1a-SM-5L3HI 7.1
GTEX-13FHP-0011-R1b-SM-5K7XL 6.9
GTEX-11ZTS-0011-R1a-SM-5BC71 6.9
GTEX-ZE7O-0011-R1a-SM-57WDM 6.8
GTEX-NPJ8-0011-R1a-SM-33HCB 6.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 5.3
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

28.0

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 28.0
FF:10153-102I9 76 years, female 40.0
FF:10374-105G5 89 years, female 22.4
FF:10169-103B7 60 years, female 21.7

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.