We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SH3GL1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA URINARY BLADDER

GENE/PROTEIN

Antibody validation


Dictionary

Urinary bladder

URINARY BLADDER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:33.1TPM
GTEx:28.2RPKM
FANTOM5:42.1Tags Per Million

URINARY BLADDER - Annotated protein expression

Annotated protein
expression

Urothelial cells:High
 

Antibody staining

Antibody HPA021485

 

Urothelial cells

High  
 
 

URINARY BLADDER - HPA RNA-seq

Average TPM

33.1

overview Male, age 74
Sample 1
TPM: 38.7
Cell types%
Urothelial cells: 5
Smooth muscle cells: 60
Fibroblasts: 20
Endothelial cells: 10
Other cell types: 5
overview Male, age 80
Sample 2
TPM: 27.6
Cell types%
Urothelial cells: 10
Smooth muscle cells: 45
Fibroblasts: 15
Endothelial cells: 10
Other cell types: 20

URINARY BLADDER - GTEx RNA-seq

Average RPKM

28.2

GTEx sample id

RPKM

26.527.929.124.330.005101520253035
 
26.527.929.124.330.005101520253035

Bladder

Bladder
RPKM: 28.2
Samples: 11

Max RPKM: 38.2
Min RPKM: 22.7
Std RPKM: 3.7
Median RPKM: 27.9
GTEX-SNMC-0826-SM-4DM66 38.2
GTEX-SNOS-0526-SM-4DM54 30.0
GTEX-S4UY-0926-SM-4AD6O 29.3
GTEX-U3ZN-1226-SM-4DXUD 28.9
GTEX-U4B1-1226-SM-4DXT7 28.5
GTEX-TMMY-1526-SM-4DXST 27.9
GTEX-SE5C-1026-SM-4BRUG 27.4
GTEX-S32W-1126-SM-4AD5V 26.9
GTEX-S4Q7-0926-SM-4AD5D 26.2
GTEX-S3XE-1226-SM-4AD4L 24.3
GTEX-U3ZM-0826-SM-4DXU6 22.7
Show all

URINARY BLADDER - FANTOM5 CAGE

Average Tags Per Million

42.1

FANTOM5 sample id

Sample description

Tags Per Million

Bladder
Tags Per Million: 42.1
FF:10011-101C2 55,58,79 years, mixed 42.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.