Tissue expression of SCYL1 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	43.9	TPM
GTEx:	32.7	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	Not detected
Neuronal cells:	Low
Neuropil:	Not detected

Antibody staining	Antibody HPA015015
Endothelial cells	Low
Glial cells	Not detected
Neuronal cells	Low
Neuropil	Not detected

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	43.9

Male, age 5

Sample 1
TPM: 47.2

Female, age 40

Sample 2
TPM: 36.9

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 47.7

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	32.7

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 34.4

Samples: 114

Max RPKM: 56.1
Min RPKM: 18.1
Std RPKM: 6.8
Median RPKM: 35.5

GTEX-X585-3026-SM-46MWF

56.1

GTEX-T5JC-2426-SM-3NMDB

47.1

GTEX-WWYW-3126-SM-3NB39

44.2

GTEX-14BMV-3026-SM-5S2PQ

44.1

GTEX-QVJO-1426-SM-2S1QY

44.1

GTEX-WVLH-3026-SM-3MJG9

44.0

GTEX-13SLX-3126-SM-5S2Q5

43.9

GTEX-ZYFD-3026-SM-5E44C

43.8

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 31.0

Samples: 108

Max RPKM: 47.5
Min RPKM: 12.9
Std RPKM: 7.5
Median RPKM: 32.7

GTEX-13NYS-0011-R10a-SM-5MR4S

47.5

GTEX-X585-0011-R10A-SM-46MUY

43.1

GTEX-14ASI-0011-R10b-SM-5S2VZ

42.8

GTEX-T5JC-0011-R10A-SM-32PM2

42.0

GTEX-X4XX-0011-R10B-SM-46MWO

41.5

GTEX-145MG-0011-R10a-SM-5PNWG

41.2

GTEX-12WSF-0011-R10a-SM-5LZVH

40.9

GTEX-ZF28-0011-R10a-SM-4WWEH

40.8

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue