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TISSUE ATLAS PRIMARY DATA SPLEEN
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:61.7TPM
GTEx:79.2RPKM
FANTOM5:106.9Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:High
Cells in white pulp:Low
 

Antibody staining

Antibody HPA031314

 

Cells in red pulp

High  

Cells in white pulp

Low  
 
 
 

SPLEEN - HPA RNA-seq

Average TPM

61.7

overview Female, age 60
Sample 1
TPM: 53.6
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 50.7
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 78.3
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 55.5
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 70.5
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

79.2

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 79.2
Samples: 104

Max RPKM: 246.7
Min RPKM: 34.8
Std RPKM: 39.8
Median RPKM: 69
GTEX-ZZPU-0126-SM-5E446 246.7
GTEX-ZV6S-0826-SM-5NQ6Z 241.3
GTEX-13X6H-0726-SM-5Q5BX 218.7
GTEX-O5YT-0926-SM-48TDG 179.1
GTEX-ZP4G-0326-SM-4YCEF 144.8
GTEX-XAJ8-0126-SM-47JYG 143.8
GTEX-T5JW-0126-SM-4DM6K 136.8
GTEX-Y5LM-0326-SM-4VBRN 136.3
GTEX-11EQ9-0426-SM-5A5JY 135.2
GTEX-U4B1-0526-SM-4DXTK 133.3
GTEX-Y3I4-0126-SM-4TT26 132.7
GTEX-1399S-0226-SM-5IFFG 122.5
GTEX-144GN-2126-SM-5O99D 117.5
GTEX-12WSJ-0526-SM-5GCOZ 116.2
GTEX-139YR-0426-SM-5IFFV 114.2
GTEX-YEC4-0126-SM-4W21T 114.0
GTEX-12WSN-0126-SM-5DUX5 111.4
GTEX-ZYFG-0726-SM-5GIDX 107.5
GTEX-11LCK-0126-SM-5A5M5 105.8
GTEX-14DAR-0326-SM-5S2PS 105.4
GTEX-132QS-0226-SM-5IFFZ 99.1
GTEX-S4Z8-0226-SM-4AD5K 95.9
GTEX-UJHI-0126-SM-4IHLP 95.5
GTEX-11XUK-0426-SM-5EQML 95.4
GTEX-Y8LW-0126-SM-4VBS1 94.7
GTEX-146FQ-0626-SM-5LU9U 94.3
GTEX-QMRM-0226-SM-4R1K7 93.0
GTEX-XPVG-0626-SM-4B65B 92.9
GTEX-QDVN-0526-SM-48TZ4 90.5
GTEX-YB5E-0426-SM-5IFHR 89.4
GTEX-WFON-0126-SM-4LVM9 88.5
GTEX-131XG-0426-SM-5IFGD 87.2
GTEX-Z9EW-0726-SM-5HL9H 85.4
GTEX-ZVP2-0526-SM-51MSC 84.1
GTEX-ZDTT-1026-SM-5KM19 83.4
GTEX-12BJ1-0726-SM-5EGGF 82.5
GTEX-QV31-0126-SM-447BP 82.2
GTEX-U3ZN-0126-SM-4DXUM 80.9
GTEX-11VI4-0126-SM-5GU6Z 80.8
GTEX-P4QS-0926-SM-48TBS 80.8
GTEX-ZLWG-0426-SM-4WWFA 78.8
GTEX-145MN-0126-SM-5RQHY 78.0
GTEX-XUJ4-0226-SM-4BOP8 77.0
GTEX-13CF3-0226-SM-5J1NW 76.9
GTEX-11P81-1326-SM-5GU5S 76.0
GTEX-VJYA-0126-SM-4KL1P 75.2
GTEX-13FH7-1326-SM-5IFG8 74.6
GTEX-11DXX-0726-SM-5H12X 73.4
GTEX-QLQW-0126-SM-447BK 73.2
GTEX-147F3-0126-SM-5NQBJ 72.0
GTEX-139T6-0226-SM-5IFGZ 71.9
GTEX-11P7K-0426-SM-5BC5H 69.1
GTEX-1122O-0526-SM-5N9DM 68.8
GTEX-XGQ4-0126-SM-4AT4H 68.5
GTEX-14E6E-1226-SM-5S2R5 67.0
GTEX-RUSQ-0126-SM-47JWV 66.4
GTEX-ZVZP-0726-SM-59HKA 65.5
GTEX-Y3IK-0126-SM-4WWE9 65.3
GTEX-1211K-0426-SM-5FQTP 64.6
GTEX-XMK1-0126-SM-4B65F 63.5
GTEX-13S86-0126-SM-5S2PI 63.2
GTEX-YFCO-0926-SM-5LUA5 62.9
GTEX-12WSG-0926-SM-5EGIH 62.8
GTEX-R55G-0226-SM-48FEI 62.2
GTEX-WHWD-0126-SM-4OORS 60.0
GTEX-13PL7-1126-SM-5MR5O 59.8
GTEX-ZLFU-0526-SM-4WWBN 59.4
GTEX-S3XE-0626-SM-4AD6B 58.7
GTEX-OIZH-0926-SM-48TBR 58.3
GTEX-POMQ-0126-SM-48TD6 58.1
GTEX-XXEK-0126-SM-4BRVU 58.1
GTEX-ZYWO-0226-SM-5GZX3 57.2
GTEX-X4LF-0226-SM-4QAS8 57.1
GTEX-146FR-1926-SM-5NQA6 56.9
GTEX-13PVR-0326-SM-5RQJY 55.2
GTEX-131XE-1126-SM-5EGHW 55.0
GTEX-PLZ6-0126-SM-48TC6 55.0
GTEX-XQ8I-1726-SM-4BOQB 53.3
GTEX-13VXT-1326-SM-5LU3Y 52.8
GTEX-Q2AH-0226-SM-48U1I 52.4
GTEX-13111-0126-SM-5EGHO 51.8
GTEX-12WSK-0126-SM-5GCO7 51.5
GTEX-YB5K-1926-SM-4VDT4 50.7
GTEX-QV44-0126-SM-4R1KH 49.2
GTEX-P4PP-0926-SM-48TBZ 48.7
GTEX-ZAB5-0526-SM-5CVMU 48.4
GTEX-X3Y1-0126-SM-4PQZA 47.0
GTEX-13U4I-1626-SM-5IFFR 44.4
GTEX-Q734-0226-SM-48U1A 42.8
GTEX-QCQG-0226-SM-48U28 42.5
GTEX-13N11-0126-SM-5KM2Z 42.3
GTEX-W5WG-0626-SM-4SOID 42.3
GTEX-Y114-0726-SM-4TT6U 41.0
GTEX-11NSD-0426-SM-5N9CR 40.3
GTEX-X585-1826-SM-4QAS3 39.7
GTEX-XV7Q-0126-SM-4BRVK 38.9
GTEX-PX3G-0926-SM-48U12 38.7
GTEX-PW2O-0126-SM-48TC8 38.0
GTEX-U3ZH-0126-SM-4DXUK 38.0
GTEX-UPK5-1626-SM-4JBHI 37.5
GTEX-OOBJ-0926-SM-48TDO 36.6
GTEX-117YX-2126-SM-5GIEL 36.4
GTEX-ZPU1-1026-SM-4YCEQ 35.6
GTEX-1399R-0226-SM-5IJGG 34.8
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

106.9

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 106.9
FF:10025-101D7 39,50,70 years, male 106.9

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