Tissue expression of NBPF3 - Staining in colon

COLON - Expression summary

Protein expression

RNA expression

HPA:	1.2	TPM
GTEx:	1.5	RPKM
FANTOM5:	2.9	Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Not detected
Glandular cells:	Not detected
Peripheral nerve/ganglion:	Low

Antibody staining	Antibody HPA042595	Antibody HPA043692	Antibody HPA044023	Antibody HPA046971	Antibody HPA058050
Endothelial cells	High	Not detected	Not detected	Low	Not detected
Glandular cells	Not detected	Not detected	Low	Not detected	Medium
Peripheral nerve/ganglion	Not detected	Low	Low	Medium

COLON - HPA RNA-seq

Average TPM	1.2

Male, age 54

Sample 1
TPM: 0.9

Cell types%

Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25

Female, age 57

Sample 2
TPM: 3.2

Cell types%

Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55

Male, age 80

Sample 3
TPM: 0.9

Cell types%

Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40

Male, age 68

Sample 4
TPM: 0.5

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 68

Sample 5
TPM: 1.0

Cell types%

Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70

Female, age 61

Sample 6
TPM: 1.7

Cell types%

Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30

Male, age 80

Sample 7
TPM: 2.2

Cell types%

Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65

Female, age 78

Sample 8
TPM: 0.6

Cell types%

Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50

Male, age 84

Sample 9
TPM: 0.9

Cell types%

Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35

Male, age 80

Sample 10
TPM: 0.2

Cell types%

Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45

Female, age 78

Sample 11
TPM: 0.0

Cell types%

Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55

Female, age 69

Sample 12
TPM: 1.5

Cell types%

Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45

Female, age 72

Sample 13
TPM: 2.7

Cell types%

Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM	1.5

GTEx sample id

RPKM

Colon - Sigmoid

Colon - Sigmoid
RPKM: 1.2

Samples: 149

Max RPKM: 2.6
Min RPKM: 0.4
Std RPKM: 0.4
Median RPKM: 1.1

GTEX-XXEK-1826-SM-4BRVC

2.6

GTEX-YJ8A-1726-SM-5P9IQ

2.6

GTEX-ZVT3-2826-SM-5GU6A

2.4

GTEX-131YS-2926-SM-5EGKI

2.2

GTEX-13X6K-2726-SM-5O9DG

2.0

GTEX-145ME-1126-SM-5SIAT

2.0

GTEX-WQUQ-2626-SM-4MVNP

2.0

GTEX-12ZZY-2726-SM-5EQ45

1.9

Show all

Colon - Transverse

Colon - Transverse
RPKM: 1.7

Samples: 196

Max RPKM: 5.3
Min RPKM: 0.5
Std RPKM: 0.8
Median RPKM: 1.6

GTEX-13O3O-2526-SM-5L3DR

5.3

GTEX-T5JW-1126-SM-4DM5V

4.9

GTEX-147JS-2526-SM-5S2Q8

4.1

GTEX-ZAB4-2226-SM-5HL97

4.0

GTEX-13PL7-2526-SM-5IFGR

3.9

GTEX-12BJ1-2126-SM-5BC5O

3.7

GTEX-12C56-0626-SM-5EGGC

3.6

GTEX-YF7O-1726-SM-5IFJ9

3.6

Show all

COLON - FANTOM5 CAGE

Average Tags Per Million	2.9

FANTOM5 sample id

Sample description

Tags Per Million

Colon
Tags Per Million: 2.9

FF:10014-101C5

62,83,84 years, mixed

2.9