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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:32.1RPKM
FANTOM5:293.2Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA029754

 

Antibody CAB010363

 

Glial cells

Medium   Low  

Neuronal cells

Medium   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

32.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 32.1
Samples: 117

Max RPKM: 143.7
Min RPKM: 6.2
Std RPKM: 17.2
Median RPKM: 30.8
GTEX-T2IS-0011-R5A-SM-32QP4 143.7
GTEX-PVOW-0011-R5A-SM-32PL7 76.6
GTEX-UTHO-0011-R5A-SM-3GIJD 71.3
GTEX-131YS-0011-R5b-SM-5K7YB 62.9
GTEX-P44H-0011-R5A-SM-2XCEX 59.6
GTEX-T6MN-0011-R5A-SM-32QPD 57.7
GTEX-12WSC-0011-R5b-SM-5CVNS 52.6
GTEX-13G51-0011-R5a-SM-5L3EB 52.1
GTEX-139TT-0011-R5b-SM-5K7W8 51.6
GTEX-QVJO-0011-R5A-SM-2S1QM 51.3
GTEX-1313W-0011-R5b-SM-5L3EP 50.3
GTEX-WL46-0011-R5A-SM-3LK6V 50.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 49.6
GTEX-S7SE-0011-R5A-SM-2XCDA 48.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 47.2
GTEX-13X6J-0011-R5b-SM-5PNWT 46.9
GTEX-WVLH-0011-R5A-SM-3MJFW 46.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 46.7
GTEX-WWYW-0011-R5A-SM-3NB3E 46.4
GTEX-145MH-0011-R5a-SM-5P9JT 46.1
GTEX-WZTO-0011-R5B-SM-3NMC5 46.1
GTEX-N7MS-0011-R5a-SM-2HMK8 45.5
GTEX-145LS-0011-R5a-SM-5SI65 44.2
GTEX-1399T-0011-R5b-SM-5IJDK 43.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 42.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 41.5
GTEX-14ABY-0011-R5b-SM-5SI7B 41.2
GTEX-14BIM-0011-R5b-SM-5S2RM 40.6
GTEX-ZUA1-0011-R5b-SM-51MTG 39.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 39.7
GTEX-11OF3-0011-R5a-SM-57WB4 39.6
GTEX-12WSF-0011-R5a-SM-5HL8K 39.2
GTEX-QMR6-0011-R5A-SM-32PKT 39.2
GTEX-Z93S-0011-R5b-SM-4RGNI 38.7
GTEX-X585-0011-R5A-SM-46MVI 38.2
GTEX-N7MT-0011-R5a-SM-2I3G6 38.0
GTEX-11NV4-0011-R5a-SM-5NQ88 37.8
GTEX-13O3O-0011-R5b-SM-5KM44 37.1
GTEX-R55E-0011-R5A-SM-2TC5N 36.9
GTEX-13FXS-0011-R5b-SM-5LZYE 36.8
GTEX-13X6I-0011-R5a-SM-5PNWW 36.8
GTEX-13SLX-0011-R5a-SM-5O9BV 36.0
GTEX-13VXU-0011-R5a-SM-5O9D7 36.0
GTEX-12WSA-0011-R5b-SM-5GU5I 35.9
GTEX-11GSP-0011-R5a-SM-57WBE 34.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 34.7
GTEX-RU72-0011-R5A-SM-2TF6U 34.2
GTEX-T5JC-0011-R5A-SM-32PLK 32.9
GTEX-12WSB-0011-R5b-SM-5GU67 32.7
GTEX-X4XX-0011-R5A-SM-46MWN 32.7
GTEX-11H98-0011-R5b-SM-57WCF 32.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 32.3
GTEX-13FLW-0011-R5a-SM-5LZX6 32.3
GTEX-13OVL-0011-R5b-SM-5L3FU 31.8
GTEX-RVPU-0011-R5A-SM-2XCAD 31.8
GTEX-13S7M-0011-R5b-SM-5P9HS 31.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 30.9
GTEX-12WSD-0011-R5b-SM-5CVNG 30.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 30.8
GTEX-13OW6-0011-R5a-SM-5O9BK 30.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 30.5
GTEX-TSE9-0011-R5A-SM-3DB7J 30.5
GTEX-13X6K-0011-R5b-SM-5PNUE 30.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 29.9
GTEX-132Q8-0011-R5a-SM-5IJDM 29.3
GTEX-13CZV-0011-R5a-SM-5K7XA 28.8
GTEX-NL4W-0011-R5a-SM-2I3GD 27.0
GTEX-YFC4-0011-R5a-SM-4RGLR 27.0
GTEX-13OW7-0011-R5b-SM-5O9DM 26.7
GTEX-13JUV-0011-R5a-SM-5LZY5 26.1
GTEX-RVPV-0011-R5A-SM-2TF69 26.1
GTEX-13OVH-0011-R5b-SM-5KM4L 25.4
GTEX-ZE7O-0011-R5a-SM-57WBO 25.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 24.9
GTEX-11WQC-0011-R5a-SM-5BC74 24.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 24.3
GTEX-13NYS-0011-R5a-SM-5MR4D 23.9
GTEX-ZXG5-0011-R5b-SM-57WBN 23.8
GTEX-13FLV-0011-R5a-SM-5LZWT 23.4
GTEX-XMD1-0011-R5A-SM-4AT47 23.3
GTEX-13NYB-0011-R5a-SM-5MR45 23.2
GTEX-14BIN-0011-R5b-SM-5SI78 22.8
GTEX-13OW5-0011-R5b-SM-5L3FR 22.1
GTEX-NL3H-0011-R5a-SM-2I3GB 21.9
GTEX-OHPN-0011-R5A-SM-2I5FF 21.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 21.7
GTEX-XOTO-0011-R5A-SM-4B657 21.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 21.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 20.8
GTEX-12ZZX-0011-R5a-SM-5HL89 20.6
GTEX-OXRN-0011-R5A-SM-2I5EF 19.7
GTEX-12WSH-0011-R5b-SM-5P9F3 19.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 19.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 19.1
GTEX-144GO-0011-R5a-SM-5PNUR 18.6
GTEX-13JVG-0011-R5a-SM-5MR4O 17.7
GTEX-NPJ7-0011-R5a-SM-33HBK 16.8
GTEX-ZVT3-0011-R5a-SM-51MSI 16.0
GTEX-13CIG-0011-R5b-SM-5L3F2 15.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 15.3
GTEX-144GL-0011-R5b-SM-5PNUJ 14.9
GTEX-X261-0011-R5A-SM-3NMB4 14.9
GTEX-YJ89-0011-R5a-SM-4V6GM 14.9
GTEX-139TS-0011-R5b-SM-5J2MZ 14.0
GTEX-13FHP-0011-R5b-SM-5LZY2 14.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 13.8
GTEX-1445S-0011-R5a-SM-5PNUS 13.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 13.0
GTEX-ZV68-0011-R5a-SM-4YCDW 12.8
GTEX-13112-0011-R5b-SM-5DUV8 12.7
GTEX-S7PM-0011-R5A-SM-3NM8G 12.6
GTEX-11UD1-0011-R5b-SM-5P9FP 10.9
GTEX-1477Z-0011-R5b-SM-5PNUO 10.3
GTEX-13CF2-0011-R5a-SM-5LZWS 10.0
GTEX-139T8-0011-R5b-SM-5J1MO 9.3
GTEX-145MG-0011-R5b-SM-5S2VU 6.8
GTEX-13NZA-0011-R5b-SM-5KM4K 6.2
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

293.2

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 293.2
FF:10164-103B2 76 years, female 349.5
FF:10379-105H1 89 years, female 236.8

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