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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:317.2TPM
GTEx:42.6RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:High
Neuropil:Medium
 

Antibody staining

Antibody HPA029754

 

Antibody CAB010363

 

Endothelial cells

Medium   Not detected  

Glial cells

Low   Low  

Neuronal cells

Medium   High  

Neuropil

Medium   Medium  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

317.2

N/A Male, age 5
Sample 1
TPM: 347.7
overview Female, age 40
Sample 2
TPM: 217.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 386.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

42.6

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 33.2
Samples: 114

Max RPKM: 76.5
Min RPKM: 14.8
Std RPKM: 10.3
Median RPKM: 32.7
GTEX-PVOW-2526-SM-2XCF7 76.5
GTEX-QMR6-1426-SM-32PLA 62.5
GTEX-TSE9-3026-SM-3DB76 56.3
GTEX-UTHO-3026-SM-3GAFB 54.1
GTEX-T2IS-3026-SM-32QPM 52.9
GTEX-RNOR-2326-SM-2TF4I 50.4
GTEX-WVLH-3026-SM-3MJG9 47.7
GTEX-13NYC-2826-SM-5K7WR 47.4
GTEX-WZTO-2926-SM-3NM9I 47.2
GTEX-X4XX-3026-SM-3NMB2 47.0
GTEX-WL46-2926-SM-3LK82 46.3
GTEX-11DXY-3226-SM-5GIDE 44.1
GTEX-131YS-3126-SM-5KLYT 43.3
GTEX-YFC4-3126-SM-5PNV6 43.2
GTEX-111FC-3126-SM-5GZZ2 42.9
GTEX-ZAK1-3026-SM-5S2MJ 42.9
GTEX-11NUK-2926-SM-5A5MD 42.7
GTEX-WWYW-3126-SM-3NB39 42.5
GTEX-145MH-3026-SM-5Q5DZ 42.2
GTEX-14BMV-3026-SM-5S2PQ 42.2
GTEX-Y8DK-0826-SM-4TT3T 42.2
GTEX-T5JC-2426-SM-3NMDB 42.1
GTEX-ZUA1-3026-SM-59HJC 41.9
GTEX-XLM4-3026-SM-4AT6L 41.1
GTEX-QDT8-2926-SM-32PKC 40.5
GTEX-12ZZZ-3026-SM-5BC67 40.3
GTEX-13FXS-3126-SM-5J2NN 39.5
GTEX-12ZZX-2926-SM-5GCOQ 39.2
GTEX-14ASI-3026-SM-5S2PN 39.2
GTEX-13FLW-1426-SM-5K7YE 38.8
GTEX-13OVH-3026-SM-5MR4N 38.7
GTEX-1313W-3126-SM-5LZUI 38.6
GTEX-11PRG-2926-SM-5987A 38.4
GTEX-11ZUS-2926-SM-5FQSL 38.4
GTEX-13FHO-3026-SM-5J1O9 38.3
GTEX-13FHP-3026-SM-5IJBS 37.8
GTEX-WHSE-3026-SM-3P5ZH 37.8
GTEX-QVJO-1426-SM-2S1QY 37.7
GTEX-T6MN-2626-SM-32PMQ 36.6
GTEX-13OW6-3026-SM-5J2MI 36.3
GTEX-12WSH-3026-SM-5CVNI 36.0
GTEX-13G51-3026-SM-5IJB8 35.6
GTEX-14A5I-2926-SM-5Q5CQ 35.3
GTEX-145LS-3126-SM-5Q5BY 34.7
GTEX-12ZZY-3026-SM-5GCOU 34.6
GTEX-Z93S-2926-SM-57WB9 34.4
GTEX-13VXU-2926-SM-5LU5C 34.2
GTEX-13PL6-3126-SM-5LUAR 34.1
GTEX-X585-3026-SM-46MWF 34.1
GTEX-QVUS-2826-SM-3GADB 34.0
GTEX-R55F-1326-SM-5S2V4 33.6
GTEX-13O3Q-2926-SM-5KM45 33.5
GTEX-117XS-3026-SM-5N9CA 33.3
GTEX-12WSC-3026-SM-5GCNF 33.2
GTEX-1192X-3126-SM-5N9BY 33.1
GTEX-11O72-2926-SM-5BC4V 32.9
GTEX-145MG-3026-SM-5RQJA 32.9
GTEX-132Q8-3026-SM-5PNVG 32.6
GTEX-1128S-2726-SM-5H12C 32.2
GTEX-13NYS-3126-SM-5KLYV 32.2
GTEX-13X6J-3026-SM-5Q5CU 32.2
GTEX-ZYFD-3026-SM-5E44C 32.2
GTEX-144GL-3026-SM-5Q5CW 31.8
GTEX-RU72-3026-SM-5SI7Y 31.7
GTEX-13SLX-3126-SM-5S2Q5 31.5
GTEX-11GSO-2926-SM-5HL73 31.3
GTEX-11OF3-2926-SM-5HL78 31.3
GTEX-1399T-3026-SM-5KLZC 31.0
GTEX-XOTO-3026-SM-4B65M 31.0
GTEX-11DXW-1126-SM-5H12Q 30.6
GTEX-13NYB-3026-SM-5IJD7 30.5
GTEX-NPJ8-1526-SM-2D7VU 30.2
GTEX-12126-1026-SM-5P9JJ 30.0
GTEX-13X6K-2926-SM-5Q5D5 29.8
GTEX-13O3O-3126-SM-5KM3H 29.5
GTEX-ZVT3-3026-SM-5E43N 29.5
GTEX-Q2AG-2926-SM-2HMJ3 29.4
GTEX-145MF-2726-SM-5O995 29.3
GTEX-N7MT-1126-SM-5SI7V 28.7
GTEX-13OW8-2826-SM-5L3GC 28.5
GTEX-13QIC-2926-SM-5J2NF 28.4
GTEX-OXRN-2426-SM-2I5EQ 27.9
GTEX-Y111-2726-SM-4TT3N 27.5
GTEX-YJ89-3026-SM-5IFJI 26.7
GTEX-11ONC-2926-SM-5P9JM 26.5
GTEX-ZAJG-3126-SM-5HL9J 26.2
GTEX-ZE7O-3126-SM-5HL5X 25.0
GTEX-11GS4-3126-SM-5A5LH 24.6
GTEX-11NV4-2126-SM-5N9DS 24.6
GTEX-NPJ7-2726-SM-2I3FT 24.3
GTEX-11EI6-3026-SM-5GZZO 24.1
GTEX-13S7M-3126-SM-5RQJQ 23.8
GTEX-ZZPT-3026-SM-5GZXH 23.7
GTEX-13OW7-3026-SM-5L3GY 23.5
GTEX-147GR-3026-SM-5S2ML 22.4
GTEX-12ZZW-2926-SM-5LZUP 21.9
GTEX-11EMC-3226-SM-5EGKW 21.5
GTEX-PWO3-0926-SM-2I5EY 21.5
GTEX-13IVO-2926-SM-5L3CZ 21.1
GTEX-131XW-3126-SM-5LZUC 20.9
GTEX-13JVG-3126-SM-5L3FH 20.8
GTEX-12WSD-3126-SM-5HL7P 20.4
GTEX-13JUV-2926-SM-5LZX7 20.2
GTEX-139T8-1026-SM-5J2MC 20.0
GTEX-13OVJ-2826-SM-5L3GW 19.5
GTEX-13PVQ-3026-SM-5SI93 19.5
GTEX-11WQK-3026-SM-5EQL6 19.2
GTEX-11OC5-0726-SM-5P9JK 18.4
GTEX-11GSP-3226-SM-5986O 17.1
GTEX-1117F-3226-SM-5N9CT 16.7
GTEX-11TTK-2926-SM-5PNYP 16.5
GTEX-12WSA-2926-SM-5EQ4D 15.5
GTEX-144FL-3026-SM-5O99C 14.9
GTEX-1445S-3026-SM-5O9BR 14.8
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 52.5
Samples: 108

Max RPKM: 111.4
Min RPKM: 11.3
Std RPKM: 20.4
Median RPKM: 55.1
GTEX-QDT8-0011-R10A-SM-32PKG 111.4
GTEX-WVLH-0011-R10A-SM-3MJFM 96.4
GTEX-T6MN-0011-R10A-SM-32QP7 94.7
GTEX-WWYW-0011-R10A-SM-3NB35 88.9
GTEX-QMR6-0011-R10A-SM-32PKO 88.2
GTEX-S7SE-0011-R10A-SM-2XCDF 87.5
GTEX-WL46-0011-R10A-SM-3MJFQ 86.5
GTEX-QVJO-0011-R10A-SM-2S1QJ 84.1
GTEX-YFC4-0011-R10a-SM-4SOK5 83.2
GTEX-12WSE-0011-R10b-SM-5P9JV 81.1
GTEX-X585-0011-R10A-SM-46MUY 79.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 79.1
GTEX-X4XX-0011-R10B-SM-46MWO 75.5
GTEX-145MH-0011-R10b-SM-5PNUK 74.1
GTEX-X4EP-0011-R10B-SM-4QASJ 72.3
GTEX-131XH-0011-R10a-SM-5EGLJ 71.9
GTEX-NL3H-0011-R10A-SM-2I3E9 70.3
GTEX-13O3Q-0011-R10b-SM-5KM39 69.8
GTEX-145MG-0011-R10a-SM-5PNWG 69.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 68.7
GTEX-YJ89-0011-R10a-SM-4SOK9 68.3
GTEX-WZTO-0011-R10B-SM-4E3KB 68.2
GTEX-12ZZY-0011-R10b-SM-5HL7W 68.0
GTEX-Y8DK-0011-R10A-SM-4SOK1 67.0
GTEX-14BIN-0011-R10a-SM-5S2UA 66.9
GTEX-13FLW-0011-R10b-SM-5LZZF 66.6
GTEX-12WSM-0011-R10a-SM-5DUWV 66.0
GTEX-13X6J-0011-R10b-SM-5PNWA 65.6
GTEX-ZVZQ-0011-R10b-SM-51MRT 64.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 64.6
GTEX-131YS-0011-R10b-SM-5EQ5N 64.5
GTEX-1313W-0011-R10b-SM-5DUXA 63.7
GTEX-QVUS-0011-R10A-SM-3GIK3 63.4
GTEX-12126-0011-R10b-SM-5BC6T 61.3
GTEX-12WSH-0011-R10a-SM-5LZUS 61.2
GTEX-13S7M-0011-R10b-SM-5PNZB 60.9
GTEX-13X6K-0011-R10a-SM-5P9JR 60.8
GTEX-13QIC-0011-R10a-SM-5O9C7 60.7
GTEX-12WSC-0011-R10a-SM-5GU57 59.9
GTEX-N7MS-0011-R10A-SM-2HMJK 59.8
GTEX-T5JC-0011-R10A-SM-32PM2 59.7
GTEX-14ASI-0011-R10b-SM-5S2VZ 59.5
GTEX-13CZV-0011-R10b-SM-5LZYD 59.1
GTEX-Z93S-0011-R10a-SM-4RGNM 58.4
GTEX-12WSF-0011-R10a-SM-5LZVH 57.7
GTEX-132Q8-0011-R10b-SM-5DUWZ 57.3
GTEX-ZF28-0011-R10a-SM-4WWEH 56.8
GTEX-11H98-0011-R10b-SM-5NQ98 56.7
GTEX-13X6I-0011-R10a-SM-5PNWI 56.5
GTEX-13RTJ-0011-R10b-SM-5O9CW 56.3
GTEX-P44H-0011-R10A-SM-2XCEK 56.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC 55.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 55.3
GTEX-ZAB4-0011-R10a-SM-4SOKH 55.2
GTEX-XLM4-0011-R10A-SM-4AT5P 54.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 54.6
GTEX-TSE9-0011-R10A-SM-3DB7O 53.7
GTEX-147GR-0011-R10b-SM-5S2UM 53.3
GTEX-13FXS-0011-R10a-SM-5J2MA 52.7
GTEX-ZUA1-0011-R10a-SM-51MT6 52.4
GTEX-13OVL-0011-R10a-SM-5L3GS 51.7
GTEX-13FHO-0011-R10b-SM-5J2MM 51.2
GTEX-145LS-0011-R10a-SM-5PNUQ 49.9
GTEX-13SLX-0011-R10a-SM-5P9HV 48.2
GTEX-13G51-0011-R10b-SM-5LZYF 47.5
GTEX-N7MT-0011-R10A-SM-2I3E1 47.4
GTEX-OXRN-0011-R10A-SM-2I5GC 47.3
GTEX-14BIL-0011-R10a-SM-5SI75 46.9
GTEX-13OW6-0011-R10a-SM-5L3HE 46.2
GTEX-13O3O-0011-R10a-SM-5LUA9 45.6
GTEX-ZVT3-0011-R10b-SM-57WB6 45.1
GTEX-13NYB-0011-R10a-SM-5KM43 43.0
GTEX-13N1W-0011-R10b-SM-5MR4H 42.9
GTEX-12WSD-0011-R10b-SM-5GU79 42.6
GTEX-13NYS-0011-R10a-SM-5MR4S 42.5
GTEX-11ZUS-0011-R10b-SM-5BC79 42.3
GTEX-13OW7-0011-R10a-SM-5L3H3 41.7
GTEX-13FLV-0011-R10b-SM-5LZZ2 40.7
GTEX-139TS-0011-R10a-SM-5K7TU 39.0
GTEX-13JUV-0011-R10b-SM-5LZXR 37.7
GTEX-145LU-0011-R10a-SM-5PNWJ 37.4
GTEX-XMD1-0011-R10A-SM-4AT4A 37.4
GTEX-13OW8-0011-R10a-SM-5L3H6 35.7
GTEX-147F4-0011-R10b-SM-5S2WC 35.7
GTEX-13QJC-0011-R10a-SM-5SI63 33.8
GTEX-ZE7O-0011-R10a-SM-57WAZ 33.4
GTEX-13FTZ-0011-R10b-SM-5KLZS 32.7
GTEX-ZXG5-0011-R10a-SM-57WDD 31.1
GTEX-13SLW-0011-R10a-SM-5S2UI 30.8
GTEX-RVPU-0011-R10A-SM-2XCAH 30.7
GTEX-11WQC-0011-R10a-SM-57WCT 29.5
GTEX-NL4W-0011-R10A-SM-2I3DY 29.2
GTEX-OXRO-0011-R10A-SM-2I5EH 27.4
GTEX-11WQK-0011-R10a-SM-5BC6R 27.2
GTEX-12ZZW-0011-R10b-SM-5HL9X 26.8
GTEX-X261-0011-R10B-SM-4E3JT 26.2
GTEX-11GSP-0011-R10a-SM-5NQ7J 23.9
GTEX-13NZA-0011-R10b-SM-5KM54 23.4
GTEX-13N2G-0011-R10a-SM-5MR34 22.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 21.3
GTEX-12WSA-0011-R10b-SM-5P9ET 20.7
GTEX-13IVO-0011-R10a-SM-5LZY3 19.0
GTEX-13JVG-0011-R10b-SM-5KM2P 18.8
GTEX-14753-0011-R10b-SM-5S2WE 17.7
GTEX-1445S-0011-R10a-SM-5PNWB 17.0
GTEX-1477Z-0011-R10b-SM-5S2RF 16.0
GTEX-ZV68-0011-R10a-SM-51MT7 13.8
GTEX-131XW-0011-R10a-SM-5DUVA 11.3
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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