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GPA33
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TISSUE ATLAS PRIMARY DATA SMALL INTESTINE

GENE/PROTEIN

Antibody validation


Dictionary

Small intestine

Tissue proteome

Small intestine

SMALL INTESTINE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:133.9TPM
GTEx:66.3RPKM
FANTOM5:306.4Tags Per Million

SMALL INTESTINE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA018858

 

Antibody CAB025943

 

Glandular cells

High   Medium  
   
   
   

SMALL INTESTINE - HPA RNA-seq

Average TPM

133.9

overview Male, age 65
Sample 1
TPM: 112.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 39
Sample 2
TPM: 157.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 68
Sample 3
TPM: 115.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 15
Other cell types: 55
N/A Male, age 85
Sample 4
TPM: 151.1

SMALL INTESTINE - GTEx RNA-seq

Average RPKM

66.3

GTEx sample id

RPKM

29.565.3100.80.1170.8020406080100120140160
 
29.565.3100.80.1170.8020406080100120140160

Small Intestine - Terminal Ileum

Small Intestine - Terminal Ileum
RPKM: 66.3
Samples: 88

Max RPKM: 170.8
Min RPKM: 0.1
Std RPKM: 45.9
Median RPKM: 65.2
GTEX-14DAR-1426-SM-5RQIR 170.8
GTEX-111YS-1426-SM-5GID8 157.2
GTEX-ZTSS-0926-SM-59865 154.3
GTEX-13D11-0726-SM-5LZZB 150.7
GTEX-ZTX8-0526-SM-59HLD 145.4
GTEX-13FTW-2026-SM-5IJE2 145.3
GTEX-ZPCL-1726-SM-57WEO 137.7
GTEX-145LT-1026-SM-5LU9O 134.4
GTEX-Y9LG-1626-SM-5IFHM 132.4
GTEX-YB5E-1526-SM-5IFIE 128.6
GTEX-1122O-1326-SM-5H11F 127.7
GTEX-ZVZP-1826-SM-5GZXB 126.2
GTEX-ZYWO-1526-SM-5SIAL 120.4
GTEX-YEC4-1726-SM-4W21E 119.8
GTEX-YF7O-1826-SM-5IFIU 119.3
GTEX-XXEK-1026-SM-4BRUW 117.9
GTEX-11DXX-1626-SM-5H11H 115.5
GTEX-XBED-1426-SM-4AT4G 114.5
GTEX-ZYFG-2026-SM-5E43Y 111.5
GTEX-11I78-1126-SM-5A5K5 110.6
GTEX-11EQ9-1326-SM-5985X 105.4
GTEX-ZLV1-1126-SM-4WWBW 102.5
GTEX-XGQ4-1326-SM-4GIDU 100.2
GTEX-11DXZ-1326-SM-5H11X 96.7
GTEX-ZZ64-0526-SM-5GZXM 94.4
GTEX-XUZC-1426-SM-4BRV3 93.0
GTEX-133LE-1426-SM-5IFH1 92.3
GTEX-13PL7-2626-SM-5IFH4 89.8
GTEX-139YR-2226-SM-5IFFW 88.6
GTEX-1399S-2026-SM-5KM4B 88.5
GTEX-X5EB-1626-SM-4E3IV 87.7
GTEX-13113-1226-SM-5EGHT 79.1
GTEX-ZA64-1226-SM-5HL7B 77.4
GTEX-131XF-1326-SM-5GCMQ 76.3
GTEX-ZEX8-1826-SM-57WBH 75.7
GTEX-ZVT2-2126-SM-5NQ93 75.1
GTEX-ZXES-1526-SM-5NQ95 73.6
GTEX-ZPIC-2326-SM-57WDW 72.9
GTEX-ZTPG-2626-SM-57WFX 69.6
GTEX-11P7K-1626-SM-5GU63 69.3
GTEX-WQUQ-2426-SM-4MVNW 68.1
GTEX-139T6-1026-SM-5IJGC 67.9
GTEX-13CF3-1226-SM-5LZXN 67.1
GTEX-1399R-2026-SM-5K7WN 65.3
GTEX-11P82-0826-SM-5P9GU 65.2
GTEX-ZVP2-1726-SM-5GU5P 62.9
GTEX-WFJO-0926-SM-4LVM2 59.4
GTEX-ZLFU-1526-SM-4WWBT 56.2
GTEX-14E6E-1626-SM-5RQI7 54.9
GTEX-13FH7-1226-SM-5IJFK 51.3
GTEX-12BJ1-1926-SM-5HL9Z 49.8
GTEX-WH7G-1626-SM-4LVMY 49.4
GTEX-Y114-1426-SM-4TT6W 46.6
GTEX-1399U-2126-SM-5IFEZ 46.6
GTEX-11XUK-1426-SM-5EQMG 45.8
GTEX-Y5LM-1626-SM-4VDTB 45.2
GTEX-13O61-1326-SM-5KM31 44.2
GTEX-WFG8-1626-SM-4LVMB 43.2
GTEX-VJYA-0926-SM-4KL1N 40.4
GTEX-11NSD-1726-SM-5N9C3 39.6
GTEX-13RTK-0826-SM-5Q5C6 38.8
GTEX-WFG7-1726-SM-4LVME 38.8
GTEX-XAJ8-0526-SM-47JYK 37.9
GTEX-131XG-1726-SM-5LZUR 34.9
GTEX-Y3IK-1726-SM-4YCCR 30.6
GTEX-Z9EW-0926-SM-5CVMM 29.8
GTEX-13O21-1026-SM-5IJDU 28.7
GTEX-ZP4G-1626-SM-57WGD 26.3
GTEX-11VI4-1626-SM-5EQKO 21.9
GTEX-WRHK-1026-SM-4MVOD 19.2
GTEX-X15G-1426-SM-4PQZK 15.9
GTEX-13QBU-1926-SM-5IJEW 15.5
GTEX-145ME-0926-SM-5O9AR 12.8
GTEX-12WSK-1526-SM-5CVNO 12.0
GTEX-ZQG8-2526-SM-57WEQ 9.2
GTEX-13OVI-1926-SM-5IJCG 7.4
GTEX-VUSG-1726-SM-4KKZL 7.2
GTEX-111CU-1326-SM-5NQ8L 5.8
GTEX-ZQUD-0926-SM-57WE3 5.6
GTEX-ZF2S-1726-SM-57WFT 4.4
GTEX-148VJ-2226-SM-5NQ9M 3.7
GTEX-WEY5-1526-SM-4LMJF 1.6
GTEX-117YX-0326-SM-5GICL 1.5
GTEX-13111-1426-SM-5DUW3 1.2
GTEX-UPK5-2026-SM-4JBIM 1.1
GTEX-XMK1-1826-SM-4B66F 1.0
GTEX-ZC5H-2326-SM-4WAYT 0.6
GTEX-1192X-2526-SM-59868 0.1
Show all

SMALL INTESTINE - FANTOM5 CAGE

Average Tags Per Million

306.4

FANTOM5 sample id

Sample description

Tags Per Million

Small intestine
Tags Per Million: 306.4
FF:10024-101D6 15,40,85 years, mixed 306.4

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The Human Protein Atlas project is funded
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