Expression of C1orf43 in cancer - Summary

CANCER ATLAS

Gene description

Chromosome 1 open reading frame 43

Protein class

Predicted intracellular proteins, Predicted membrane proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA010725

GENE INFORMATION
Gene name	C1orf43 (HGNC Symbol)
Synonyms	DKFZp586G1722, NICE-3
Description	Chromosome 1 open reading frame 43 (HGNC Symbol)
Entrez gene summary
Chromosome	1
Cytoband	q21.3
Chromosome location (bp)	154206706 - 154220628
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000143612 (version 83.38)
Entrez gene	25912
UniProt	Q9BWL3 (UniProt - Evidence at transcript level)
neXtProt	NX_Q9BWL3
Antibodypedia	C1orf43 antibodies

PROTEIN BROWSER

C1orf43-001	C1orf43-002	C1orf43-003	C1orf43-004	C1orf43-006	C1orf43-009

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
C1orf43-001 ENSP00000271925 ENST00000350592	Q9BWL3 [Direct mapping] Uncharacterized protein C1orf43 Q09GN0 [Target identity:100%; Query identity:100%] Chromosome 1 open reading frame 43, isoform CRA_b; NS5ATP4A Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] GO:0016491 [oxidoreductase activity] GO:0055114 [oxidation-reduction process] Show all	219 aa 24.8 kDa	No	0
C1orf43-002 ENSP00000357507 ENST00000368521	Q9BWL3 [Direct mapping] Uncharacterized protein C1orf43 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] GO:0016491 [oxidoreductase activity] GO:0055114 [oxidation-reduction process] Show all	253 aa 28.8 kDa	No	1
C1orf43-003 ENSP00000357504 ENST00000368518	Q9BWL3 [Direct mapping] Uncharacterized protein C1orf43 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] GO:0016491 [oxidoreductase activity] GO:0055114 [oxidation-reduction process] Show all	189 aa 21.6 kDa	No	1
C1orf43-004 ENSP00000354496 ENST00000362076	Q9BWL3 [Direct mapping] Uncharacterized protein C1orf43 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] GO:0016491 [oxidoreductase activity] GO:0055114 [oxidation-reduction process] Show all	201 aa 22.7 kDa	No	0
C1orf43-006 ENSP00000357505 ENST00000368519	X6R6S3 [Direct mapping] Uncharacterized protein C1orf43 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Ezkurdia et al 2014) Show all	GO:0016021 [integral component of membrane] GO:0016491 [oxidoreductase activity] GO:0055114 [oxidation-reduction process] Show all	235 aa 26.6 kDa	No	1
C1orf43-009 ENSP00000357502 ENST00000368516	X6R6F3 [Direct mapping] Uncharacterized protein C1orf43 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		155 aa 17.6 kDa	No	0