Tissue expression of SDE2 - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	13.4	TPM
GTEx:	12.4	RPKM
FANTOM5:	42.5	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Fibroblasts:	Medium
Chondrocytes:	Medium
Peripheral nerve:	Low

Antibody staining	Antibody HPA028467	Antibody HPA031255	Antibody HPA031256
Adipocytes	Medium	Medium	Medium
Fibroblasts	Medium
Chondrocytes	Medium	Medium
Peripheral nerve	Low	Low

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Medium
Chondrocytes:	Medium
Fibroblasts:	Medium
Peripheral nerve:	Low

Antibody staining	Antibody HPA028467	Antibody HPA031255	Antibody HPA031256
Adipocytes	Not detected	Medium	Low
Chondrocytes	Not detected	Low	Medium
Fibroblasts	Medium	Medium	Medium
Peripheral nerve	Medium	Low	Low

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	13.4

Female, age 80

Sample 1
TPM: 10.8

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 8.1

Female, age 57

Sample 3
TPM: 6.4

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 17.6

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 24.3

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	12.4

GTEx sample id

RPKM

Adipose - Subcutaneous

Adipose - Subcutaneous
RPKM: 11.8

Samples: 350

Max RPKM: 54.4
Min RPKM: 3.8
Std RPKM: 6.2
Median RPKM: 10.2

GTEX-NL3G-0226-SM-4RGLU

54.4

GTEX-ZE7O-0226-SM-5S2N1

45.0

GTEX-XK95-0426-SM-4AT4R

39.6

GTEX-139D8-0326-SM-5IJCJ

38.2

GTEX-ZE9C-2826-SM-5S2MO

36.2

GTEX-SNMC-1326-SM-2XCFK

35.8

GTEX-11WQC-2426-SM-5EQKQ

34.6

GTEX-YJ89-0226-SM-4TT3Y

34.0

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Adipose - Visceral (Omentum)

Adipose - Visceral (Omentum)
RPKM: 13.4

Samples: 227

Max RPKM: 47.4
Min RPKM: 3.5
Std RPKM: 7.4
Median RPKM: 11.4

GTEX-1399T-1326-SM-5PNVH

47.4

GTEX-113JC-0726-SM-5GZZR

45.0

GTEX-ZE7O-1526-SM-5J1NH

39.6

GTEX-12ZZW-2326-SM-5DUW2

34.5

GTEX-1192X-1526-SM-5H11I

34.1

GTEX-12ZZX-1726-SM-5BC63

33.9

GTEX-XOT4-0826-SM-4B66Y

32.5

GTEX-XBEC-1826-SM-4QASN

32.3

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ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	42.5

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 42.5

FF:10010-101C1

65,65,76 years, mixed

42.5