Tissue expression of SDE2 - Staining in esophagus

ESOPHAGUS - Expression summary

Protein expression

RNA expression

HPA:	10.8	TPM
GTEx:	5.5	RPKM
FANTOM5:	19.8	Tags Per Million

ESOPHAGUS - Annotated protein expression

Annotated protein
expression

Squamous epithelial cells:

High

Antibody staining	Antibody HPA028467	Antibody HPA031255	Antibody HPA031256
Squamous epithelial cells	High	Medium	High

ESOPHAGUS - HPA RNA-seq

Average TPM	10.8

Female, age 70

Sample 1
TPM: 10.1

Cell types%

Squamous epithelial cells: 35
Smooth muscle cells: 15
Skeletal muscle cells: 5
Other cell types: 45

Male, age 38

Sample 2
TPM: 11.3

Cell types%

Squamous epithelial cells: 60
Smooth muscle cells: 20
Other cell types: 20

Male, age 76

Sample 3
TPM: 10.9

Cell types%

Squamous epithelial cells: 45
Smooth muscle cells: 15
Other cell types: 40

ESOPHAGUS - GTEx RNA-seq

Average RPKM	5.5

GTEx sample id

RPKM

Esophagus - Mucosa

Esophagus - Mucosa
RPKM: 5.5

Samples: 286

Max RPKM: 12.3
Min RPKM: 2.3
Std RPKM: 1.4
Median RPKM: 5.1

GTEX-13FLV-1126-SM-5J2NO

12.3

GTEX-13RTK-0526-SM-5S2QF

10.9

GTEX-T5JW-1326-SM-4DM5G

10.4

GTEX-13O1R-1326-SM-5IJF5

10.0

GTEX-145MF-1426-SM-5O9B6

9.9

GTEX-14BMU-0926-SM-5S2QB

9.9

GTEX-1212Z-2126-SM-5FQTM

9.2

GTEX-11ZU8-1526-SM-5EGHX

9.1

Show all

ESOPHAGUS - FANTOM5 CAGE

Average Tags Per Million	19.8

FANTOM5 sample id

Sample description

Tags Per Million

Esophagus
Tags Per Million: 19.8

FF:10015-101C6

68,74,75 years, mixed

19.8