We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PYCR2
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:29.8RPKM
FANTOM5:38.3Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA056873

 

Glial cells

Not detected  

Neuronal cells

Not detected  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

29.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 29.8
Samples: 117

Max RPKM: 46.1
Min RPKM: 14.4
Std RPKM: 6.4
Median RPKM: 29.7
GTEX-13X6K-0011-R5b-SM-5PNUE 46.1
GTEX-12WSA-0011-R5b-SM-5GU5I 45.8
GTEX-139T8-0011-R5b-SM-5J1MO 45.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 44.4
GTEX-13JVG-0011-R5a-SM-5MR4O 43.1
GTEX-13NYB-0011-R5a-SM-5MR45 43.0
GTEX-132Q8-0011-R5a-SM-5IJDM 41.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 40.4
GTEX-X585-0011-R5A-SM-46MVI 40.0
GTEX-1399T-0011-R5b-SM-5IJDK 39.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 38.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 38.3
GTEX-13OW6-0011-R5a-SM-5O9BK 38.2
GTEX-N7MS-0011-R5a-SM-2HMK8 37.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 36.8
GTEX-RVPV-0011-R5A-SM-2TF69 36.2
GTEX-11H98-0011-R5b-SM-57WCF 36.1
GTEX-13FLV-0011-R5a-SM-5LZWT 36.0
GTEX-XMD1-0011-R5A-SM-4AT47 35.7
GTEX-13X6I-0011-R5a-SM-5PNWW 35.6
GTEX-N7MT-0011-R5a-SM-2I3G6 35.5
GTEX-QVJO-0011-R5A-SM-2S1QM 35.5
GTEX-12WSB-0011-R5b-SM-5GU67 35.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 34.9
GTEX-13OVH-0011-R5b-SM-5KM4L 34.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 34.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 33.4
GTEX-XOTO-0011-R5A-SM-4B657 33.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 33.1
GTEX-ZUA1-0011-R5b-SM-51MTG 32.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 32.6
GTEX-13VXU-0011-R5a-SM-5O9D7 32.4
GTEX-NL4W-0011-R5a-SM-2I3GD 32.3
GTEX-13G51-0011-R5a-SM-5L3EB 32.2
GTEX-T6MN-0011-R5A-SM-32QPD 32.2
GTEX-11GSP-0011-R5a-SM-57WBE 32.1
GTEX-WWYW-0011-R5A-SM-3NB3E 32.0
GTEX-13OW7-0011-R5b-SM-5O9DM 31.9
GTEX-WL46-0011-R5A-SM-3LK6V 31.9
GTEX-139TS-0011-R5b-SM-5J2MZ 31.7
GTEX-13JUV-0011-R5a-SM-5LZY5 31.7
GTEX-12WSC-0011-R5b-SM-5CVNS 31.5
GTEX-145LS-0011-R5a-SM-5SI65 31.4
GTEX-WVLH-0011-R5A-SM-3MJFW 31.0
GTEX-X4XX-0011-R5A-SM-46MWN 30.9
GTEX-11NV4-0011-R5a-SM-5NQ88 30.8
GTEX-12WSF-0011-R5a-SM-5HL8K 30.8
GTEX-ZE7O-0011-R5a-SM-57WBO 30.8
GTEX-145MH-0011-R5a-SM-5P9JT 30.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 30.5
GTEX-TSE9-0011-R5A-SM-3DB7J 30.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 30.4
GTEX-R55E-0011-R5A-SM-2TC5N 30.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 30.1
GTEX-13FLW-0011-R5a-SM-5LZX6 30.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 30.0
GTEX-YFC4-0011-R5a-SM-4RGLR 29.9
GTEX-13NYS-0011-R5a-SM-5MR4D 29.7
GTEX-NPJ7-0011-R5a-SM-33HBK 29.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 29.7
GTEX-144GO-0011-R5a-SM-5PNUR 29.4
GTEX-WZTO-0011-R5B-SM-3NMC5 29.3
GTEX-13O3O-0011-R5b-SM-5KM44 29.0
GTEX-14ABY-0011-R5b-SM-5SI7B 29.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 28.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 28.5
GTEX-11OF3-0011-R5a-SM-57WB4 28.4
GTEX-13FXS-0011-R5b-SM-5LZYE 28.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 28.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 28.4
GTEX-ZVT3-0011-R5a-SM-51MSI 28.1
GTEX-139TT-0011-R5b-SM-5K7W8 27.8
GTEX-1445S-0011-R5a-SM-5PNUS 27.6
GTEX-QMR6-0011-R5A-SM-32PKT 27.2
GTEX-S7SE-0011-R5A-SM-2XCDA 27.2
GTEX-12WSD-0011-R5b-SM-5CVNG 27.1
GTEX-ZXG5-0011-R5b-SM-57WBN 27.1
GTEX-1313W-0011-R5b-SM-5L3EP 26.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 26.9
GTEX-13SLX-0011-R5a-SM-5O9BV 26.8
GTEX-144GL-0011-R5b-SM-5PNUJ 26.4
GTEX-11WQC-0011-R5a-SM-5BC74 26.2
GTEX-131YS-0011-R5b-SM-5K7YB 26.2
GTEX-13CZV-0011-R5a-SM-5K7XA 26.2
GTEX-X261-0011-R5A-SM-3NMB4 26.1
GTEX-13OVL-0011-R5b-SM-5L3FU 26.0
GTEX-OHPN-0011-R5A-SM-2I5FF 26.0
GTEX-WHSE-0011-R5A-SM-3P5ZO 25.9
GTEX-ZV68-0011-R5a-SM-4YCDW 25.9
GTEX-14BIM-0011-R5b-SM-5S2RM 25.8
GTEX-13OW5-0011-R5b-SM-5L3FR 25.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 25.4
GTEX-12ZZX-0011-R5a-SM-5HL89 25.4
GTEX-13112-0011-R5b-SM-5DUV8 24.7
GTEX-13X6J-0011-R5b-SM-5PNWT 24.6
GTEX-14BIN-0011-R5b-SM-5SI78 24.5
GTEX-RU72-0011-R5A-SM-2TF6U 24.5
GTEX-13S7M-0011-R5b-SM-5P9HS 24.0
GTEX-T5JC-0011-R5A-SM-32PLK 23.7
GTEX-13CF2-0011-R5a-SM-5LZWS 23.1
GTEX-11UD1-0011-R5b-SM-5P9FP 22.8
GTEX-P44H-0011-R5A-SM-2XCEX 22.8
GTEX-Z93S-0011-R5b-SM-4RGNI 22.8
GTEX-13FHP-0011-R5b-SM-5LZY2 21.9
GTEX-YJ89-0011-R5a-SM-4V6GM 21.9
GTEX-12WSH-0011-R5b-SM-5P9F3 21.1
GTEX-UTHO-0011-R5A-SM-3GIJD 20.7
GTEX-13CIG-0011-R5b-SM-5L3F2 20.5
GTEX-RVPU-0011-R5A-SM-2XCAD 20.4
GTEX-NL3H-0011-R5a-SM-2I3GB 20.3
GTEX-OXRN-0011-R5A-SM-2I5EF 20.1
GTEX-1477Z-0011-R5b-SM-5PNUO 20.0
GTEX-PVOW-0011-R5A-SM-32PL7 19.9
GTEX-S7PM-0011-R5A-SM-3NM8G 19.1
GTEX-145MG-0011-R5b-SM-5S2VU 17.8
GTEX-T2IS-0011-R5A-SM-32QP4 14.5
GTEX-13NZA-0011-R5b-SM-5KM4K 14.4
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

38.3

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 38.3
FF:10379-105H1 89 years, female 39.7
FF:10164-103B2 76 years, female 36.9

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.