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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA017324

 

Antibody HPA072701

 

Antibody CAB018649

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Santa Cruz Biotechnology
 

Product name

HPA017324   HPA072701   sc-20727  

Host species

Rabbit   Rabbit   Rabbit  

Clonality

pAb   pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Protein A/G  

Other gene match

     

Released in version

5   16   5  

References

     

VALIDATION SUMMARY

 
 

Antibody HPA017324

 

Antibody HPA072701

 

Antibody CAB018649

 
Immunocytochemistry

  Approved    
Immunohistochemistry

Supported     Supported  
Western blot

Uncertain     Uncertain  
Protein array

Approved   Supported    

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA017324

 

Antibody HPA072701

 

Antibody CAB018649

 

Standard validation

  Approved    

     

Figure description

  Immunofluorescent staining of human cell line SH-SY5Y shows localization to endoplasmic reticulum.    

Antibody dilution

  1:76    

Literature conformity

  The subcellular location is partly supported by literature or no literature is available.    

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA017324

 

Antibody HPA072701

 

Antibody CAB018649

 

Standard validation

Supported     Supported  

     

Figure description

Immunohistochemical staining of human pancreas shows distinct cytoplasmic positivity in islet cells.     Immunohistochemical staining of human pancreas shows strong cytoplasmic positivity in islet cells.  

Expression

RNA: detected in 19 tissues
Protein: detected in 38 cell types
    RNA: detected in 19 tissues
Protein: detected in 50 cell types
 

Retrieval

HIER pH6     HIER pH6  

Antibody dilution

1:20     1:200  

Literature conformity

Partly consistent with extensive gene/protein characterization data.     Partly consistent with extensive gene/protein characterization data.  

RNA consistency

Mainly not consistent with RNA expression data.     Mainly not consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA017324

 

Antibody HPA072701

 

Antibody CAB018649

 

Standard validation

Uncertain

No bands detected.
    Uncertain

Analysis performed using a standard panel of samples.
Weak band of predicted size but with additional bands of higher intensity also present.
 

     

Figure description

Lane 1: Marker [kDa] 250, 130, 95, 72, 55, 36, 28, 17, 10
Lane 2: Negative control (vector only transfected HEK293T lysate)
Lane 3: Over-expression Lysate (Co-expressed with a C-terminal myc-DDK tag (~3.1 kDa) in mammalian HEK293T cells, LY405128)
     

Target mass (kDa)

19.2, 19.1, 13.4     19.2, 19.1, 13.4  

Antibody dilution

1:250     1:500  

PROTEIN ARRAY

 
 

Antibody HPA017324

 

Antibody HPA072701

 

Antibody CAB018649

 

Standard validation

Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
   

     

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.    

Antibody dilution

1:500   1:3050    

ANTIGEN INFORMATION

 
 

Antibody HPA017324

 

Antibody HPA072701

 

Antibody CAB018649

 

Antigen

Recombinant protein fragment   Recombinant protein fragment   Recombinant protein  

Length (aa)

123   20    

Antigen sequence

EGANEPDQVSLKEDIDMLQNALAENDTPYYDVSRNARHADGVFTSDFSKL
LGQLSAKKYLESLMGKRVSSNISEDPVPVKRHSDAVFTDNYTRLRKQMAV
KKYLNSILNGKRSSEGESPDFPE
 
AWPLYRAPSALRLGDRIPFE
   

Matching transcripts

VIP-001 - ENSP00000356213 [100%]
VIP-002 - ENSP00000356212 [99%]
VIP-003 - ENSP00000410356 [93%]
  VIP-001 - ENSP00000356213 [100%]
VIP-002 - ENSP00000356212 [100%]
   

Other gene match

     
ANTIGEN VIEW
VIP-001
VIP-002
VIP-003
 

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The Human Protein Atlas project is funded
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