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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:90.2TPM
GTEx:30.7RPKM
FANTOM5:42.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA057707

  

Adipocytes

 Low  

Chondrocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Fibroblasts:Medium
Peripheral nerve:Medium
 
 
 

Antibody staining

Antibody HPA057707

  

Fibroblasts

 High  

Peripheral nerve

 High  
    
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

90.2
N/A Female, age 80
Sample 1
TPM: 95.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 57.8
N/A Female, age 57
Sample 3
TPM: 51.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 134.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 111.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

30.7

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 30.3
Samples: 350

Max RPKM: 48.5
Min RPKM: 17.6
Std RPKM: 5.1
Median RPKM: 30.2
GTEX-13OVI-1326-SM-5IJBO 48.5
GTEX-TSE9-0226-SM-3DB84 48.4
GTEX-W5X1-2626-SM-4LMI8 44.5
GTEX-13N2G-2726-SM-5J1MG 43.7
GTEX-X261-0226-SM-3NMD2 42.3
GTEX-111FC-0226-SM-5N9B8 41.8
GTEX-QDT8-0226-SM-32PL4 41.7
GTEX-131XE-2426-SM-5EQ5V 40.6
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 31.3
Samples: 227

Max RPKM: 48.7
Min RPKM: 16.7
Std RPKM: 6.8
Median RPKM: 30.8
GTEX-13S7M-0826-SM-5QGQX 48.7
GTEX-14DAQ-2526-SM-5RQIO 48.6
GTEX-131YS-1726-SM-5HL7G 47.4
GTEX-11DXY-0326-SM-5H12F 47.3
GTEX-14BIN-1226-SM-5S2OM 47.1
GTEX-XLM4-1026-SM-4AT51 47.0
GTEX-ZUA1-2126-SM-57YRB 47.0
GTEX-117YW-0826-SM-5H11O 46.8
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

42.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 42.8
FF:10010-101C1 65,65,76 years, mixed 42.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.