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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

RNA expression

HPA:2.1TPM
GTEx:6.2RPKM

CEREBRAL CORTEX - Annotated protein expression

 

Antibody staining

Antibody HPA062111

 

Antibody CAB010885

 

Endothelial cells

Medium   Medium  

Glial cells

Low   Medium  

Neuronal cells

Medium   High  

Neuropil

Low   High  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

2.1

N/A Male, age 5
Sample 1
TPM: 0.8
overview Female, age 40
Sample 2
TPM: 1.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 3.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

6.2

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 5.6
Samples: 114

Max RPKM: 19.1
Min RPKM: 0
Std RPKM: 4.1
Median RPKM: 5.6
GTEX-Y111-2726-SM-4TT3N 19.1
GTEX-13SLX-3126-SM-5S2Q5 17.6
GTEX-PVOW-2526-SM-2XCF7 14.3
GTEX-12126-1026-SM-5P9JJ 13.4
GTEX-117XS-3026-SM-5N9CA 13.3
GTEX-12WSC-3026-SM-5GCNF 12.9
GTEX-11ZUS-2926-SM-5FQSL 12.8
GTEX-131YS-3126-SM-5KLYT 12.7
GTEX-RNOR-2326-SM-2TF4I 12.1
GTEX-11NUK-2926-SM-5A5MD 11.8
GTEX-ZUA1-3026-SM-59HJC 11.3
GTEX-12ZZZ-3026-SM-5BC67 11.2
GTEX-145MG-3026-SM-5RQJA 11.0
GTEX-T2IS-3026-SM-32QPM 10.8
GTEX-WZTO-2926-SM-3NM9I 10.3
GTEX-11PRG-2926-SM-5987A 10.1
GTEX-XOTO-3026-SM-4B65M 10.1
GTEX-13PL6-3126-SM-5LUAR 9.9
GTEX-13OVH-3026-SM-5MR4N 9.8
GTEX-145MH-3026-SM-5Q5DZ 9.8
GTEX-13X6J-3026-SM-5Q5CU 9.7
GTEX-11EMC-3226-SM-5EGKW 9.6
GTEX-ZE7O-3126-SM-5HL5X 9.0
GTEX-13FXS-3126-SM-5J2NN 8.9
GTEX-14BMV-3026-SM-5S2PQ 8.9
GTEX-12WSD-3126-SM-5HL7P 8.8
GTEX-144GL-3026-SM-5Q5CW 8.6
GTEX-13X6K-2926-SM-5Q5D5 8.5
GTEX-Y8DK-0826-SM-4TT3T 8.5
GTEX-14ASI-3026-SM-5S2PN 7.9
GTEX-WVLH-3026-SM-3MJG9 7.9
GTEX-1128S-2726-SM-5H12C 7.8
GTEX-TSE9-3026-SM-3DB76 7.8
GTEX-13OW7-3026-SM-5L3GY 7.7
GTEX-11DXY-3226-SM-5GIDE 7.6
GTEX-11GSO-2926-SM-5HL73 7.6
GTEX-12ZZX-2926-SM-5GCOQ 7.6
GTEX-WL46-2926-SM-3LK82 7.5
GTEX-1313W-3126-SM-5LZUI 7.2
GTEX-13VXU-2926-SM-5LU5C 7.2
GTEX-13OW6-3026-SM-5J2MI 7.0
GTEX-OXRN-2426-SM-2I5EQ 7.0
GTEX-ZYFD-3026-SM-5E44C 6.8
GTEX-YJ89-3026-SM-5IFJI 6.7
GTEX-13O3Q-2926-SM-5KM45 6.6
GTEX-145MF-2726-SM-5O995 6.6
GTEX-11OC5-0726-SM-5P9JK 6.5
GTEX-T6MN-2626-SM-32PMQ 6.5
GTEX-12ZZY-3026-SM-5GCOU 6.4
GTEX-147GR-3026-SM-5S2ML 6.3
GTEX-T5JC-2426-SM-3NMDB 6.1
GTEX-12WSH-3026-SM-5CVNI 5.9
GTEX-Q2AG-2926-SM-2HMJ3 5.9
GTEX-YFC4-3126-SM-5PNV6 5.9
GTEX-13FLW-1426-SM-5K7YE 5.8
GTEX-111FC-3126-SM-5GZZ2 5.6
GTEX-13QIC-2926-SM-5J2NF 5.6
GTEX-ZAK1-3026-SM-5S2MJ 5.5
GTEX-WHSE-3026-SM-3P5ZH 5.4
GTEX-11ONC-2926-SM-5P9JM 5.2
GTEX-131XW-3126-SM-5LZUC 5.0
GTEX-Z93S-2926-SM-57WB9 4.9
GTEX-11NV4-2126-SM-5N9DS 4.8
GTEX-13FHP-3026-SM-5IJBS 4.8
GTEX-1399T-3026-SM-5KLZC 4.4
GTEX-13NYB-3026-SM-5IJD7 4.3
GTEX-13PVQ-3026-SM-5SI93 4.3
GTEX-13O3O-3126-SM-5KM3H 4.1
GTEX-14A5I-2926-SM-5Q5CQ 4.1
GTEX-11WQK-3026-SM-5EQL6 4.0
GTEX-13OVJ-2826-SM-5L3GW 3.8
GTEX-11EI6-3026-SM-5GZZO 3.5
GTEX-11GS4-3126-SM-5A5LH 3.4
GTEX-11O72-2926-SM-5BC4V 3.4
GTEX-ZVT3-3026-SM-5E43N 3.2
GTEX-11GSP-3226-SM-5986O 3.1
GTEX-13OW8-2826-SM-5L3GC 2.9
GTEX-13S7M-3126-SM-5RQJQ 2.5
GTEX-11DXW-1126-SM-5H12Q 2.4
GTEX-QMR6-1426-SM-32PLA 2.3
GTEX-R55F-1326-SM-5S2V4 2.1
GTEX-WWYW-3126-SM-3NB39 2.1
GTEX-ZAJG-3126-SM-5HL9J 2.1
GTEX-RU72-3026-SM-5SI7Y 1.9
GTEX-13JVG-3126-SM-5L3FH 1.8
GTEX-13FHO-3026-SM-5J1O9 1.7
GTEX-X585-3026-SM-46MWF 1.7
GTEX-X4XX-3026-SM-3NMB2 1.6
GTEX-13G51-3026-SM-5IJB8 1.3
GTEX-1445S-3026-SM-5O9BR 1.3
GTEX-QDT8-2926-SM-32PKC 1.3
GTEX-139T8-1026-SM-5J2MC 1.2
GTEX-13JUV-2926-SM-5LZX7 1.2
GTEX-XLM4-3026-SM-4AT6L 1.2
GTEX-144FL-3026-SM-5O99C 1.1
GTEX-145LS-3126-SM-5Q5BY 1.1
GTEX-13NYC-2826-SM-5K7WR 1.0
GTEX-12ZZW-2926-SM-5LZUP 0.8
GTEX-1192X-3126-SM-5N9BY 0.7
GTEX-QVJO-1426-SM-2S1QY 0.7
GTEX-QVUS-2826-SM-3GADB 0.5
GTEX-N7MT-1126-SM-5SI7V 0.4
GTEX-NPJ7-2726-SM-2I3FT 0.4
GTEX-UTHO-3026-SM-3GAFB 0.4
GTEX-1117F-3226-SM-5N9CT 0.3
GTEX-11TTK-2926-SM-5PNYP 0.3
GTEX-132Q8-3026-SM-5PNVG 0.3
GTEX-13IVO-2926-SM-5L3CZ 0.3
GTEX-NPJ8-1526-SM-2D7VU 0.3
GTEX-13NYS-3126-SM-5KLYV 0.2
GTEX-PWO3-0926-SM-2I5EY 0.2
GTEX-ZZPT-3026-SM-5GZXH 0.2
GTEX-12WSA-2926-SM-5EQ4D 0.1
GTEX-11OF3-2926-SM-5HL78 0.0
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 6.9
Samples: 108

Max RPKM: 29.6
Min RPKM: 0
Std RPKM: 5.6
Median RPKM: 6
GTEX-12126-0011-R10b-SM-5BC6T 29.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 24.2
GTEX-13SLX-0011-R10a-SM-5P9HV 20.0
GTEX-N7MS-0011-R10A-SM-2HMJK 17.0
GTEX-13X6J-0011-R10b-SM-5PNWA 15.9
GTEX-13OW7-0011-R10a-SM-5L3H3 15.4
GTEX-12WSC-0011-R10a-SM-5GU57 14.9
GTEX-1313W-0011-R10b-SM-5DUXA 14.9
GTEX-13FXS-0011-R10a-SM-5J2MA 14.8
GTEX-ZUA1-0011-R10a-SM-51MT6 14.3
GTEX-147GR-0011-R10b-SM-5S2UM 13.9
GTEX-S7SE-0011-R10A-SM-2XCDF 13.6
GTEX-11ZUS-0011-R10b-SM-5BC79 13.5
GTEX-TSE9-0011-R10A-SM-3DB7O 13.4
GTEX-13FLV-0011-R10b-SM-5LZZ2 13.0
GTEX-14ASI-0011-R10b-SM-5S2VZ 13.0
GTEX-13NZA-0011-R10b-SM-5KM54 12.6
GTEX-WL46-0011-R10A-SM-3MJFQ 12.3
GTEX-T6MN-0011-R10A-SM-32QP7 12.2
GTEX-12WSE-0011-R10b-SM-5P9JV 11.9
GTEX-13FTZ-0011-R10b-SM-5KLZS 11.8
GTEX-145LU-0011-R10a-SM-5PNWJ 11.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 11.2
GTEX-131YS-0011-R10b-SM-5EQ5N 11.1
GTEX-12ZZZ-0011-R10a-SM-5P9HC 10.9
GTEX-13OW6-0011-R10a-SM-5L3HE 10.7
GTEX-13FLW-0011-R10b-SM-5LZZF 10.6
GTEX-13O3O-0011-R10a-SM-5LUA9 10.5
GTEX-Z93S-0011-R10a-SM-4RGNM 10.4
GTEX-13G51-0011-R10b-SM-5LZYF 10.3
GTEX-WZTO-0011-R10B-SM-4E3KB 10.3
GTEX-145MG-0011-R10a-SM-5PNWG 10.0
GTEX-145MH-0011-R10b-SM-5PNUK 10.0
GTEX-13OVL-0011-R10a-SM-5L3GS 9.9
GTEX-12WSD-0011-R10b-SM-5GU79 9.5
GTEX-12WSM-0011-R10a-SM-5DUWV 9.5
GTEX-YJ89-0011-R10a-SM-4SOK9 9.5
GTEX-13N1W-0011-R10b-SM-5MR4H 9.4
GTEX-131XH-0011-R10a-SM-5EGLJ 9.3
GTEX-14BIN-0011-R10a-SM-5S2UA 9.3
GTEX-T5JC-0011-R10A-SM-32PM2 9.0
GTEX-YFC4-0011-R10a-SM-4SOK5 9.0
GTEX-12WSH-0011-R10a-SM-5LZUS 8.8
GTEX-ZVZQ-0011-R10b-SM-51MRT 8.7
GTEX-13NYB-0011-R10a-SM-5KM43 8.2
GTEX-WVLH-0011-R10A-SM-3MJFM 8.0
GTEX-Q2AG-0011-R10A-SM-2HMLA 7.9
GTEX-11WQK-0011-R10a-SM-5BC6R 7.7
GTEX-13QIC-0011-R10a-SM-5O9C7 7.7
GTEX-139TS-0011-R10a-SM-5K7TU 7.5
GTEX-13O3Q-0011-R10b-SM-5KM39 7.2
GTEX-12WSF-0011-R10a-SM-5LZVH 6.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 6.8
GTEX-11H98-0011-R10b-SM-5NQ98 6.0
GTEX-13OW8-0011-R10a-SM-5L3H6 6.0
GTEX-ZDXO-0011-R10a-SM-4WWD8 6.0
GTEX-P44H-0011-R10A-SM-2XCEK 5.6
GTEX-OXRO-0011-R10A-SM-2I5EH 5.5
GTEX-14BIL-0011-R10a-SM-5SI75 5.3
GTEX-13S7M-0011-R10b-SM-5PNZB 5.0
GTEX-13RTJ-0011-R10b-SM-5O9CW 4.8
GTEX-11WQC-0011-R10a-SM-57WCT 4.6
GTEX-13OVJ-0011-R10b-SM-5L3HT 4.4
GTEX-13X6K-0011-R10a-SM-5P9JR 4.2
GTEX-13CZV-0011-R10b-SM-5LZYD 3.6
GTEX-147F4-0011-R10b-SM-5S2WC 3.5
GTEX-OXRN-0011-R10A-SM-2I5GC 3.5
GTEX-1477Z-0011-R10b-SM-5S2RF 3.2
GTEX-RVPU-0011-R10A-SM-2XCAH 2.7
GTEX-ZV68-0011-R10a-SM-51MT7 2.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 2.6
GTEX-QMR6-0011-R10A-SM-32PKO 2.6
GTEX-13JUV-0011-R10b-SM-5LZXR 2.4
GTEX-13N2G-0011-R10a-SM-5MR34 2.4
GTEX-X4EP-0011-R10B-SM-4QASJ 2.4
GTEX-ZXG5-0011-R10a-SM-57WDD 2.4
GTEX-131XW-0011-R10a-SM-5DUVA 2.3
GTEX-14753-0011-R10b-SM-5S2WE 2.3
GTEX-13FHO-0011-R10b-SM-5J2MM 2.2
GTEX-WWYW-0011-R10A-SM-3NB35 2.1
GTEX-N7MT-0011-R10A-SM-2I3E1 2.0
GTEX-X4XX-0011-R10B-SM-46MWO 2.0
GTEX-ZVT3-0011-R10b-SM-57WB6 1.9
GTEX-13QJC-0011-R10a-SM-5SI63 1.8
GTEX-X585-0011-R10A-SM-46MUY 1.8
GTEX-145LS-0011-R10a-SM-5PNUQ 1.6
GTEX-13JVG-0011-R10b-SM-5KM2P 1.5
GTEX-XLM4-0011-R10A-SM-4AT5P 1.5
GTEX-NL4W-0011-R10A-SM-2I3DY 1.3
GTEX-QVUS-0011-R10A-SM-3GIK3 1.3
GTEX-X261-0011-R10B-SM-4E3JT 1.3
GTEX-QDT8-0011-R10A-SM-32PKG 1.2
GTEX-ZAB4-0011-R10a-SM-4SOKH 1.2
GTEX-1445S-0011-R10a-SM-5PNWB 1.0
GTEX-NL3H-0011-R10A-SM-2I3E9 1.0
GTEX-ZF28-0011-R10a-SM-4WWEH 0.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 0.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 0.6
GTEX-13NYS-0011-R10a-SM-5MR4S 0.6
GTEX-ZE7O-0011-R10a-SM-57WAZ 0.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 0.4
GTEX-13IVO-0011-R10a-SM-5LZY3 0.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 0.3
GTEX-13X6I-0011-R10a-SM-5PNWI 0.2
GTEX-NPJ8-0011-R10A-SM-2YUMO 0.2
GTEX-13SLW-0011-R10a-SM-5S2UI 0.1
GTEX-XMD1-0011-R10A-SM-4AT4A 0.1
GTEX-12WSA-0011-R10b-SM-5P9ET 0.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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