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SH3GLB2
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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:37.9RPKM
FANTOM5:50.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA021438

 

Antibody HPA024734

 

Glial cells

High   Not detected  

Neuronal cells

High   Not detected  
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

37.9

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 37.9
Samples: 117

Max RPKM: 76.7
Min RPKM: 10.9
Std RPKM: 12.2
Median RPKM: 39.1
GTEX-WL46-0011-R5A-SM-3LK6V 76.7
GTEX-139TT-0011-R5b-SM-5K7W8 65.2
GTEX-131YS-0011-R5b-SM-5K7YB 58.6
GTEX-13G51-0011-R5a-SM-5L3EB 57.2
GTEX-X585-0011-R5A-SM-46MVI 57.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 56.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 54.5
GTEX-1313W-0011-R5b-SM-5L3EP 53.6
GTEX-145MH-0011-R5a-SM-5P9JT 53.6
GTEX-T6MN-0011-R5A-SM-32QPD 53.6
GTEX-N7MS-0011-R5a-SM-2HMK8 53.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 52.5
GTEX-R55E-0011-R5A-SM-2TC5N 52.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 51.5
GTEX-ZUA1-0011-R5b-SM-51MTG 51.4
GTEX-12WSC-0011-R5b-SM-5CVNS 51.3
GTEX-11NV4-0011-R5a-SM-5NQ88 50.6
GTEX-WZTO-0011-R5B-SM-3NMC5 50.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 49.9
GTEX-X4XX-0011-R5A-SM-46MWN 49.6
GTEX-11OF3-0011-R5a-SM-57WB4 48.5
GTEX-13X6I-0011-R5a-SM-5PNWW 48.5
GTEX-T5JC-0011-R5A-SM-32PLK 48.5
GTEX-13FXS-0011-R5b-SM-5LZYE 48.3
GTEX-Z93S-0011-R5b-SM-4RGNI 48.2
GTEX-13O3O-0011-R5b-SM-5KM44 48.0
GTEX-1399T-0011-R5b-SM-5IJDK 47.8
GTEX-WWYW-0011-R5A-SM-3NB3E 47.8
GTEX-11GSP-0011-R5a-SM-57WBE 47.6
GTEX-12WSA-0011-R5b-SM-5GU5I 46.8
GTEX-WVLH-0011-R5A-SM-3MJFW 46.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 46.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 46.1
GTEX-13NYB-0011-R5a-SM-5MR45 46.1
GTEX-WHSE-0011-R5A-SM-3P5ZO 45.6
GTEX-132Q8-0011-R5a-SM-5IJDM 44.9
GTEX-XOTO-0011-R5A-SM-4B657 44.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 44.4
GTEX-13VXU-0011-R5a-SM-5O9D7 43.8
GTEX-145LS-0011-R5a-SM-5SI65 43.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 43.6
GTEX-13SLX-0011-R5a-SM-5O9BV 43.5
GTEX-S7SE-0011-R5A-SM-2XCDA 43.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 43.2
GTEX-14BIM-0011-R5b-SM-5S2RM 43.2
GTEX-RU72-0011-R5A-SM-2TF6U 43.1
GTEX-RVPV-0011-R5A-SM-2TF69 42.9
GTEX-13FLW-0011-R5a-SM-5LZX6 42.2
GTEX-14ABY-0011-R5b-SM-5SI7B 42.2
GTEX-N7MT-0011-R5a-SM-2I3G6 42.2
GTEX-13X6K-0011-R5b-SM-5PNUE 41.6
GTEX-PVOW-0011-R5A-SM-32PL7 41.6
GTEX-13OVH-0011-R5b-SM-5KM4L 40.7
GTEX-11H98-0011-R5b-SM-57WCF 40.5
GTEX-13OVL-0011-R5b-SM-5L3FU 40.3
GTEX-13OW6-0011-R5a-SM-5O9BK 40.2
GTEX-13S7M-0011-R5b-SM-5P9HS 40.2
GTEX-P44H-0011-R5A-SM-2XCEX 40.0
GTEX-QMR6-0011-R5A-SM-32PKT 39.1
GTEX-QVJO-0011-R5A-SM-2S1QM 38.4
GTEX-13X6J-0011-R5b-SM-5PNWT 38.3
GTEX-12WSD-0011-R5b-SM-5CVNG 38.0
GTEX-13FLV-0011-R5a-SM-5LZWT 38.0
GTEX-13OW7-0011-R5b-SM-5O9DM 37.9
GTEX-13JUV-0011-R5a-SM-5LZY5 37.7
GTEX-UTHO-0011-R5A-SM-3GIJD 37.4
GTEX-12WSF-0011-R5a-SM-5HL8K 36.9
GTEX-ZE7O-0011-R5a-SM-57WBO 36.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 36.1
GTEX-13OW5-0011-R5b-SM-5L3FR 35.7
GTEX-XMD1-0011-R5A-SM-4AT47 35.2
GTEX-12WSB-0011-R5b-SM-5GU67 35.1
GTEX-OHPN-0011-R5A-SM-2I5FF 34.6
GTEX-YFC4-0011-R5a-SM-4RGLR 34.3
GTEX-RVPU-0011-R5A-SM-2XCAD 33.8
GTEX-ZXG5-0011-R5b-SM-57WBN 33.6
GTEX-13NYS-0011-R5a-SM-5MR4D 32.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 32.3
GTEX-14BIN-0011-R5b-SM-5SI78 32.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 31.7
GTEX-TSE9-0011-R5A-SM-3DB7J 31.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 31.6
GTEX-13CZV-0011-R5a-SM-5K7XA 31.1
GTEX-NL4W-0011-R5a-SM-2I3GD 30.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 30.4
GTEX-13JVG-0011-R5a-SM-5MR4O 30.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 30.1
GTEX-13FHP-0011-R5b-SM-5LZY2 29.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 28.6
GTEX-T2IS-0011-R5A-SM-32QP4 27.7
GTEX-YJ89-0011-R5a-SM-4V6GM 27.5
GTEX-139TS-0011-R5b-SM-5J2MZ 27.4
GTEX-12ZZX-0011-R5a-SM-5HL89 26.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 25.5
GTEX-144GL-0011-R5b-SM-5PNUJ 24.9
GTEX-NPJ7-0011-R5a-SM-33HBK 24.9
GTEX-12WSH-0011-R5b-SM-5P9F3 24.7
GTEX-11WQC-0011-R5a-SM-5BC74 24.5
GTEX-NL3H-0011-R5a-SM-2I3GB 23.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 22.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 22.4
GTEX-ZVT3-0011-R5a-SM-51MSI 22.0
GTEX-13112-0011-R5b-SM-5DUV8 21.6
GTEX-X261-0011-R5A-SM-3NMB4 21.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 20.4
GTEX-1445S-0011-R5a-SM-5PNUS 19.9
GTEX-144GO-0011-R5a-SM-5PNUR 19.6
GTEX-139T8-0011-R5b-SM-5J1MO 19.4
GTEX-13CIG-0011-R5b-SM-5L3F2 19.3
GTEX-OXRN-0011-R5A-SM-2I5EF 19.2
GTEX-ZV68-0011-R5a-SM-4YCDW 19.0
GTEX-13CF2-0011-R5a-SM-5LZWS 17.6
GTEX-11UD1-0011-R5b-SM-5P9FP 17.4
GTEX-1477Z-0011-R5b-SM-5PNUO 15.3
GTEX-S7PM-0011-R5A-SM-3NM8G 14.1
GTEX-13NZA-0011-R5b-SM-5KM4K 11.6
GTEX-145MG-0011-R5b-SM-5S2VU 10.9
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

50.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 50.5
FF:10164-103B2 76 years, female 59.9
FF:10379-105H1 89 years, female 41.2

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