We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SH3GLB2
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA SPLEEN

GENE/PROTEIN

Antibody validation


Dictionary

Spleen

Tissue proteome

Spleen

SPLEEN - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:35.7TPM
GTEx:42.1RPKM
FANTOM5:18.6Tags Per Million

SPLEEN - Annotated protein expression

Annotated protein
expression

Cells in red pulp:Not detected
Cells in white pulp:Medium
 

Antibody staining

Antibody HPA021438

 

Antibody HPA024734

 

Cells in red pulp

Medium   Not detected  

Cells in white pulp

High   Medium  
   
   
   

SPLEEN - HPA RNA-seq

Average TPM

35.7

overview Female, age 60
Sample 1
TPM: 42.0
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Male, age 17
Sample 2
TPM: 30.4
Cell types%
Lymphocytes: 40
Macrophages: 35
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 5
overview Male, age 20
Sample 3
TPM: 38.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 5
Other cell types: 10
overview Female, age 19
Sample 4
TPM: 43.4
Cell types%
Lymphocytes: 40
Macrophages: 30
Endothelial cells: 15
Fibroblasts: 10
Other cell types: 5
overview Female, age 65
Sample 5
TPM: 24.6
Cell types%
Lymphocytes: 35
Macrophages: 30
Endothelial cells: 20
Fibroblasts: 10
Other cell types: 5

SPLEEN - GTEx RNA-seq

Average RPKM

42.1

GTEx sample id

RPKM

 

Spleen

Spleen
RPKM: 42.1
Samples: 104

Max RPKM: 62
Min RPKM: 27.3
Std RPKM: 6.5
Median RPKM: 41.1
GTEX-XQ8I-1726-SM-4BOQB 62.0
GTEX-UPK5-1626-SM-4JBHI 59.8
GTEX-X585-1826-SM-4QAS3 56.9
GTEX-OOBJ-0926-SM-48TDO 55.3
GTEX-QV44-0126-SM-4R1KH 54.1
GTEX-XUJ4-0226-SM-4BOP8 52.8
GTEX-OIZH-0926-SM-48TBR 52.6
GTEX-S3XE-0626-SM-4AD6B 52.4
GTEX-14E6E-1226-SM-5S2R5 51.6
GTEX-P4QS-0926-SM-48TBS 50.7
GTEX-11NSD-0426-SM-5N9CR 50.4
GTEX-Y3I4-0126-SM-4TT26 50.3
GTEX-QDVN-0526-SM-48TZ4 49.9
GTEX-W5WG-0626-SM-4SOID 49.6
GTEX-X3Y1-0126-SM-4PQZA 49.5
GTEX-XXEK-0126-SM-4BRVU 49.4
GTEX-12WSJ-0526-SM-5GCOZ 49.2
GTEX-PW2O-0126-SM-48TC8 49.2
GTEX-13VXT-1326-SM-5LU3Y 48.9
GTEX-146FR-1926-SM-5NQA6 48.1
GTEX-QLQW-0126-SM-447BK 47.0
GTEX-ZLFU-0526-SM-4WWBN 46.9
GTEX-PX3G-0926-SM-48U12 46.5
GTEX-U3ZH-0126-SM-4DXUK 46.5
GTEX-X4LF-0226-SM-4QAS8 46.5
GTEX-R55G-0226-SM-48FEI 46.1
GTEX-XMK1-0126-SM-4B65F 46.0
GTEX-QV31-0126-SM-447BP 45.9
GTEX-1399R-0226-SM-5IJGG 45.7
GTEX-XGQ4-0126-SM-4AT4H 45.3
GTEX-Z9EW-0726-SM-5HL9H 45.2
GTEX-13U4I-1626-SM-5IFFR 45.0
GTEX-WFON-0126-SM-4LVM9 44.9
GTEX-Q2AH-0226-SM-48U1I 44.7
GTEX-WHWD-0126-SM-4OORS 44.6
GTEX-PLZ6-0126-SM-48TC6 43.3
GTEX-117YX-2126-SM-5GIEL 43.1
GTEX-13PL7-1126-SM-5MR5O 42.9
GTEX-Y3IK-0126-SM-4WWE9 42.9
GTEX-11DXX-0726-SM-5H12X 42.8
GTEX-11XUK-0426-SM-5EQML 42.7
GTEX-12WSK-0126-SM-5GCO7 42.5
GTEX-12WSG-0926-SM-5EGIH 42.4
GTEX-144GN-2126-SM-5O99D 42.1
GTEX-11LCK-0126-SM-5A5M5 42.0
GTEX-14DAR-0326-SM-5S2PS 42.0
GTEX-O5YT-0926-SM-48TDG 41.8
GTEX-S4Z8-0226-SM-4AD5K 41.7
GTEX-YB5K-1926-SM-4VDT4 41.4
GTEX-1211K-0426-SM-5FQTP 41.1
GTEX-P4PP-0926-SM-48TBZ 41.1
GTEX-T5JW-0126-SM-4DM6K 41.1
GTEX-146FQ-0626-SM-5LU9U 41.0
GTEX-ZLWG-0426-SM-4WWFA 41.0
GTEX-ZAB5-0526-SM-5CVMU 40.8
GTEX-13X6H-0726-SM-5Q5BX 40.7
GTEX-XV7Q-0126-SM-4BRVK 40.6
GTEX-131XE-1126-SM-5EGHW 40.5
GTEX-12BJ1-0726-SM-5EGGF 40.4
GTEX-VJYA-0126-SM-4KL1P 40.3
GTEX-XAJ8-0126-SM-47JYG 40.3
GTEX-ZVP2-0526-SM-51MSC 40.0
GTEX-UJHI-0126-SM-4IHLP 39.8
GTEX-XPVG-0626-SM-4B65B 39.8
GTEX-Q734-0226-SM-48U1A 39.7
GTEX-139YR-0426-SM-5IFFV 39.6
GTEX-ZYWO-0226-SM-5GZX3 39.6
GTEX-13N11-0126-SM-5KM2Z 39.4
GTEX-YFCO-0926-SM-5LUA5 39.3
GTEX-POMQ-0126-SM-48TD6 38.9
GTEX-ZPU1-1026-SM-4YCEQ 38.8
GTEX-1399S-0226-SM-5IFFG 38.4
GTEX-13FH7-1326-SM-5IFG8 38.4
GTEX-12WSN-0126-SM-5DUX5 38.3
GTEX-YB5E-0426-SM-5IFHR 38.2
GTEX-QMRM-0226-SM-4R1K7 38.1
GTEX-U4B1-0526-SM-4DXTK 38.1
GTEX-ZDTT-1026-SM-5KM19 37.7
GTEX-1122O-0526-SM-5N9DM 37.6
GTEX-ZVZP-0726-SM-59HKA 37.6
GTEX-11P81-1326-SM-5GU5S 37.3
GTEX-11VI4-0126-SM-5GU6Z 37.3
GTEX-13PVR-0326-SM-5RQJY 37.3
GTEX-ZP4G-0326-SM-4YCEF 37.3
GTEX-11P7K-0426-SM-5BC5H 37.2
GTEX-147F3-0126-SM-5NQBJ 37.2
GTEX-ZYFG-0726-SM-5GIDX 36.9
GTEX-145MN-0126-SM-5RQHY 36.6
GTEX-QCQG-0226-SM-48U28 36.4
GTEX-Y8LW-0126-SM-4VBS1 36.1
GTEX-RUSQ-0126-SM-47JWV 36.0
GTEX-U3ZN-0126-SM-4DXUM 35.8
GTEX-139T6-0226-SM-5IFGZ 35.6
GTEX-Y114-0726-SM-4TT6U 35.5
GTEX-11EQ9-0426-SM-5A5JY 35.0
GTEX-Y5LM-0326-SM-4VBRN 33.9
GTEX-13CF3-0226-SM-5J1NW 33.6
GTEX-13111-0126-SM-5EGHO 33.1
GTEX-131XG-0426-SM-5IFGD 32.7
GTEX-ZV6S-0826-SM-5NQ6Z 32.5
GTEX-13S86-0126-SM-5S2PI 30.0
GTEX-132QS-0226-SM-5IFFZ 28.0
GTEX-ZZPU-0126-SM-5E446 27.7
GTEX-YEC4-0126-SM-4W21T 27.3
Show all

SPLEEN - FANTOM5 CAGE

Average Tags Per Million

18.6

FANTOM5 sample id

Sample description

Tags Per Million

Spleen
Tags Per Million: 18.6
FF:10025-101D7 39,50,70 years, male 18.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.