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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:36.0RPKM
FANTOM5:172.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA008057

 

Antibody CAB002059

 

Glial cells

Low   Not detected  

Neuronal cells

Medium   Not detected  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

36.0

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 36.0
Samples: 117

Max RPKM: 96.7
Min RPKM: 3.1
Std RPKM: 19.8
Median RPKM: 36.5
GTEX-T2IS-0011-R5A-SM-32QP4 96.7
GTEX-139TT-0011-R5b-SM-5K7W8 72.2
GTEX-131YS-0011-R5b-SM-5K7YB 71.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 71.3
GTEX-145MH-0011-R5a-SM-5P9JT 69.1
GTEX-UTHO-0011-R5A-SM-3GIJD 68.1
GTEX-S7SE-0011-R5A-SM-2XCDA 65.3
GTEX-QVJO-0011-R5A-SM-2S1QM 64.3
GTEX-13G51-0011-R5a-SM-5L3EB 64.2
GTEX-11OF3-0011-R5a-SM-57WB4 63.9
GTEX-12WSC-0011-R5b-SM-5CVNS 61.9
GTEX-1313W-0011-R5b-SM-5L3EP 61.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 61.7
GTEX-P44H-0011-R5A-SM-2XCEX 60.6
GTEX-13X6J-0011-R5b-SM-5PNWT 58.9
GTEX-T6MN-0011-R5A-SM-32QPD 58.6
GTEX-13SLX-0011-R5a-SM-5O9BV 58.2
GTEX-X585-0011-R5A-SM-46MVI 58.2
GTEX-14ABY-0011-R5b-SM-5SI7B 57.4
GTEX-1399T-0011-R5b-SM-5IJDK 56.7
GTEX-WL46-0011-R5A-SM-3LK6V 56.3
GTEX-13O3O-0011-R5b-SM-5KM44 55.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 54.5
GTEX-145LS-0011-R5a-SM-5SI65 54.2
GTEX-N7MS-0011-R5a-SM-2HMK8 53.2
GTEX-PVOW-0011-R5A-SM-32PL7 53.0
GTEX-WZTO-0011-R5B-SM-3NMC5 52.4
GTEX-13VXU-0011-R5a-SM-5O9D7 52.2
GTEX-T5JC-0011-R5A-SM-32PLK 52.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 51.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 51.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50.6
GTEX-TSE9-0011-R5A-SM-3DB7J 50.5
GTEX-14BIM-0011-R5b-SM-5S2RM 49.4
GTEX-11H98-0011-R5b-SM-57WCF 49.1
GTEX-11NV4-0011-R5a-SM-5NQ88 48.0
GTEX-N7MT-0011-R5a-SM-2I3G6 47.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 47.3
GTEX-Z93S-0011-R5b-SM-4RGNI 46.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 46.5
GTEX-13FXS-0011-R5b-SM-5LZYE 46.4
GTEX-13X6K-0011-R5b-SM-5PNUE 45.8
GTEX-12WSF-0011-R5a-SM-5HL8K 45.3
GTEX-13FLW-0011-R5a-SM-5LZX6 44.2
GTEX-WHSE-0011-R5A-SM-3P5ZO 43.9
GTEX-13OVL-0011-R5b-SM-5L3FU 43.4
GTEX-R55E-0011-R5A-SM-2TC5N 43.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 42.7
GTEX-13S7M-0011-R5b-SM-5P9HS 42.6
GTEX-WWYW-0011-R5A-SM-3NB3E 42.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 42.0
GTEX-ZUA1-0011-R5b-SM-51MTG 41.0
GTEX-RU72-0011-R5A-SM-2TF6U 40.9
GTEX-13CZV-0011-R5a-SM-5K7XA 40.5
GTEX-11GSP-0011-R5a-SM-57WBE 40.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 38.8
GTEX-13OW6-0011-R5a-SM-5O9BK 38.4
GTEX-RVPU-0011-R5A-SM-2XCAD 37.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 36.5
GTEX-13OW7-0011-R5b-SM-5O9DM 34.2
GTEX-13JUV-0011-R5a-SM-5LZY5 33.2
GTEX-132Q8-0011-R5a-SM-5IJDM 33.1
GTEX-12WSD-0011-R5b-SM-5CVNG 32.8
GTEX-13OW5-0011-R5b-SM-5L3FR 32.5
GTEX-13NYS-0011-R5a-SM-5MR4D 31.9
GTEX-13X6I-0011-R5a-SM-5PNWW 31.9
GTEX-13NYB-0011-R5a-SM-5MR45 30.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 30.5
GTEX-NL4W-0011-R5a-SM-2I3GD 30.5
GTEX-13OVH-0011-R5b-SM-5KM4L 30.1
GTEX-NL3H-0011-R5a-SM-2I3GB 29.3
GTEX-RVPV-0011-R5A-SM-2TF69 27.7
GTEX-ZE7O-0011-R5a-SM-57WBO 27.3
GTEX-12WSB-0011-R5b-SM-5GU67 26.7
GTEX-14BIN-0011-R5b-SM-5SI78 26.0
GTEX-12ZZX-0011-R5a-SM-5HL89 25.9
GTEX-ZXG5-0011-R5b-SM-57WBN 25.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 25.2
GTEX-QMR6-0011-R5A-SM-32PKT 24.5
GTEX-13FLV-0011-R5a-SM-5LZWT 24.3
GTEX-YFC4-0011-R5a-SM-4RGLR 24.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 23.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 23.6
GTEX-OHPN-0011-R5A-SM-2I5FF 23.2
GTEX-XOTO-0011-R5A-SM-4B657 23.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 22.1
GTEX-144GO-0011-R5a-SM-5PNUR 20.0
GTEX-13CIG-0011-R5b-SM-5L3F2 19.2
GTEX-OXRN-0011-R5A-SM-2I5EF 19.2
GTEX-XMD1-0011-R5A-SM-4AT47 18.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 18.1
GTEX-12WSA-0011-R5b-SM-5GU5I 17.9
GTEX-12WSH-0011-R5b-SM-5P9F3 17.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 17.3
GTEX-YJ89-0011-R5a-SM-4V6GM 14.6
GTEX-13JVG-0011-R5a-SM-5MR4O 14.0
GTEX-11WQC-0011-R5a-SM-5BC74 13.1
GTEX-NPJ7-0011-R5a-SM-33HBK 12.3
GTEX-X4XX-0011-R5A-SM-46MWN 11.8
GTEX-ZVT3-0011-R5a-SM-51MSI 11.6
GTEX-X261-0011-R5A-SM-3NMB4 11.0
GTEX-13112-0011-R5b-SM-5DUV8 10.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 10.4
GTEX-ZV68-0011-R5a-SM-4YCDW 10.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 9.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 9.5
GTEX-144GL-0011-R5b-SM-5PNUJ 9.3
GTEX-13FHP-0011-R5b-SM-5LZY2 8.0
GTEX-139TS-0011-R5b-SM-5J2MZ 6.5
GTEX-1477Z-0011-R5b-SM-5PNUO 5.8
GTEX-1445S-0011-R5a-SM-5PNUS 5.4
GTEX-S7PM-0011-R5A-SM-3NM8G 4.5
GTEX-13CF2-0011-R5a-SM-5LZWS 4.4
GTEX-139T8-0011-R5b-SM-5J1MO 3.6
GTEX-13NZA-0011-R5b-SM-5KM4K 3.4
GTEX-11UD1-0011-R5b-SM-5P9FP 3.3
GTEX-145MG-0011-R5b-SM-5S2VU 3.1
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

172.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 172.4
FF:10379-105H1 89 years, female 215.4
FF:10164-103B2 76 years, female 129.3

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