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TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:27.2RPKM
FANTOM5:134.5Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Medium
 

Antibody staining

Antibody HPA008057

 

Antibody CAB002059

 

Glial cells

Low   Not detected  

Neuronal cells

Medium   Medium  
   
   
   

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

27.2

GTEx sample id

RPKM

 

Brain - Hippocampus

Brain - Hippocampus
RPKM: 27.2
Samples: 94

Max RPKM: 85
Min RPKM: 1
Std RPKM: 21.5
Median RPKM: 22
GTEX-RNOR-0011-R1A-SM-5SI8F 85.0
GTEX-T6MN-0011-R1A-SM-32QOY 85.0
GTEX-145MH-0011-R1b-SM-5PNWY 81.2
GTEX-12WSF-0011-R1a-SM-5DUVI 74.6
GTEX-WL46-0011-R1A-SM-3LK6M 72.0
GTEX-WWYW-0011-R1A-SM-3TW8G 65.0
GTEX-X585-0011-R1B-SM-46MVE 64.4
GTEX-13FLW-0011-R1b-SM-5LZX2 62.3
GTEX-R55E-0011-R1A-SM-2TC6N 61.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 55.2
GTEX-XOTO-0011-R1B-SM-4B65C 55.1
GTEX-12WSE-0011-R1b-SM-5GU4V 54.5
GTEX-TSE9-0011-R1A-SM-3DB7E 53.8
GTEX-1313W-0011-R1b-SM-5EQ4A 52.9
GTEX-13OW6-0011-R1a-SM-5L3HQ 51.8
GTEX-12WSD-0011-R1b-SM-5LZVY 47.7
GTEX-13O3O-0011-R1b-SM-5KM2K 47.5
GTEX-QDT8-0011-R1A-SM-32PKS 46.4
GTEX-139TT-0011-R1a-SM-5LZVD 46.3
GTEX-13NYB-0011-R1b-SM-5KM4F 46.0
GTEX-PVOW-0011-R1A-SM-32PL6 46.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 45.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 45.3
GTEX-131XH-0011-R1a-SM-5DUWA 43.6
GTEX-12WSH-0011-R1a-SM-5GU5V 43.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 40.0
GTEX-N7MS-0011-R1a-SM-2HMJG 38.4
GTEX-13JUV-0011-R1a-SM-5LZY4 38.3
GTEX-YFC4-0011-R1a-SM-4V6EH 37.3
GTEX-144GL-0011-R1a-SM-5PNZ5 37.3
GTEX-NL3H-0011-R1a-SM-48TDJ 34.3
GTEX-13FXS-0011-R1a-SM-5K7U6 33.7
GTEX-X4XX-0011-R1B-SM-3P622 32.6
GTEX-T5JC-0011-R1A-SM-32PM6 32.0
GTEX-QVJO-0011-R1A-SM-2S1QI 31.2
GTEX-WZTO-0011-R1B-SM-3NMAR 30.8
GTEX-13N2G-0011-R1b-SM-5MR3G 27.8
GTEX-P44H-0011-R1A-SM-3NM8J 27.7
GTEX-13X6I-0011-R1b-SM-5PNZC 27.6
GTEX-1399T-0011-R1b-SM-5DUWN 25.8
GTEX-14ASI-0011-R1b-SM-5S2TY 25.5
GTEX-QMR6-0011-R1A-SM-32PKW 25.1
GTEX-N7MT-0011-R1a-SM-5SI7S 24.6
GTEX-S7SE-0011-R1A-SM-2XCDE 23.8
GTEX-13N1W-0011-R1b-SM-5MR4T 23.7
GTEX-ZUA1-0011-R1a-SM-4YCE2 22.8
GTEX-131YS-0011-R1a-SM-5DUXC 22.1
GTEX-12WSM-0011-R1a-SM-5LZW6 21.8
GTEX-13G51-0011-R1a-SM-5LZYR 21.7
GTEX-145LS-0011-R1b-SM-5PNUP 21.6
GTEX-13112-0011-R1b-SM-5HL7K 20.8
GTEX-PWO3-0011-R1A-SM-2I5EW 19.8
GTEX-WVLH-0011-R1A-SM-4MVOK 18.7
GTEX-NPJ7-0011-R1a-SM-3GACT 18.7
GTEX-Y8DK-0011-R1A-SM-4RGLO 18.3
GTEX-13OW7-0011-R1b-SM-5L3HF 18.2
GTEX-13FHO-0011-R1b-SM-5KLZG 18.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 17.8
GTEX-13OVJ-0011-R1b-SM-5L3I6 14.9
GTEX-ZF28-0011-R1a-SM-4WWD1 14.1
GTEX-11ONC-0011-R1a-SM-57WD4 14.0
GTEX-139T8-0011-R1a-SM-5HL75 12.6
GTEX-13S7M-0011-R1b-SM-5PNZE 12.5
GTEX-YJ89-0011-R1a-SM-4RGLS 12.4
GTEX-132Q8-0011-R1a-SM-5EGLK 12.1
GTEX-QVUS-0011-R1A-SM-3GAD2 11.7
GTEX-11UD1-0011-R1b-SM-5BC7D 11.2
GTEX-13PDP-0011-R1a-SM-5PNX5 11.1
GTEX-13SLW-0011-R1a-SM-5S2W7 10.1
GTEX-145LU-0011-R1a-SM-5Q5CE 9.8
GTEX-13NYS-0011-R1b-SM-5MR55 9.5
GTEX-11GSO-0011-R1b-SM-57WD3 8.8
GTEX-13FHP-0011-R1b-SM-5K7XL 8.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 7.2
GTEX-UTHO-0011-R1A-SM-3GIJO 6.3
GTEX-13RTL-0011-R1a-SM-5PNZ8 5.5
GTEX-NPJ8-0011-R1a-SM-33HCB 5.5
GTEX-13CF2-0011-R1a-SM-5LZY1 5.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 5.1
GTEX-13OVL-0011-R1a-SM-5L3H5 4.7
GTEX-13OW8-0011-R1a-SM-5L3HI 4.6
GTEX-144GO-0011-R1a-SM-5PNWO 3.8
GTEX-ZE7O-0011-R1a-SM-57WDM 3.8
GTEX-13OW5-0011-R1b-SM-5L3GE 3.3
GTEX-13FTY-0011-R1a-SM-5LZXE 3.3
GTEX-13QJC-0011-R1b-SM-5S2UU 3.2
GTEX-XMD1-0011-R1A-SM-4AT4C 2.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 2.2
GTEX-11ZTS-0011-R1a-SM-5BC71 2.0
GTEX-13JVG-0011-R1a-SM-5KM32 1.9
GTEX-12WSB-0011-R1b-SM-5P9EY 1.7
GTEX-1212Z-0011-R1b-SM-5BC72 1.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 1.2
GTEX-13NZA-0011-R1b-SM-5LUAF 1.0
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

134.5

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 134.5
FF:10374-105G5 89 years, female 234.0
FF:10169-103B7 60 years, female 95.5
FF:10153-102I9 76 years, female 73.8

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