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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:28.1RPKM
FANTOM5:113.4Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Not detected
 

Antibody staining

Antibody HPA026687

 

Glial cells

Not detected  

Neuronal cells

Not detected  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

28.1

GTEx sample id

RPKM

19.226.936.74.751.30102030405060708090100
 
19.226.936.74.751.30102030405060708090100

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 28.1
Samples: 117

Max RPKM: 105.4
Min RPKM: 4.7
Std RPKM: 13.8
Median RPKM: 26.9
GTEX-T2IS-0011-R5A-SM-32QP4 105.4
GTEX-PVOW-0011-R5A-SM-32PL7 68.1
GTEX-P44H-0011-R5A-SM-2XCEX 51.3
GTEX-1399T-0011-R5b-SM-5IJDK 50.4
GTEX-QVJO-0011-R5A-SM-2S1QM 49.9
GTEX-WWYW-0011-R5A-SM-3NB3E 46.8
GTEX-131YS-0011-R5b-SM-5K7YB 46.0
GTEX-145MH-0011-R5a-SM-5P9JT 45.2
GTEX-Z93S-0011-R5b-SM-4RGNI 44.9
GTEX-145LS-0011-R5a-SM-5SI65 44.3
GTEX-X585-0011-R5A-SM-46MVI 44.2
GTEX-WVLH-0011-R5A-SM-3MJFW 43.5
GTEX-WL46-0011-R5A-SM-3LK6V 42.5
GTEX-139TT-0011-R5b-SM-5K7W8 42.4
GTEX-13X6J-0011-R5b-SM-5PNWT 42.1
GTEX-WZTO-0011-R5B-SM-3NMC5 41.7
GTEX-1313W-0011-R5b-SM-5L3EP 41.3
GTEX-12WSF-0011-R5a-SM-5HL8K 40.4
GTEX-13G51-0011-R5a-SM-5L3EB 40.4
GTEX-N7MS-0011-R5a-SM-2HMK8 39.9
GTEX-12WSC-0011-R5b-SM-5CVNS 39.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 39.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 38.9
GTEX-13SLX-0011-R5a-SM-5O9BV 38.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 37.9
GTEX-14ABY-0011-R5b-SM-5SI7B 37.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 37.1
GTEX-S7SE-0011-R5A-SM-2XCDA 37.0
GTEX-13VXU-0011-R5a-SM-5O9D7 36.9
GTEX-13O3O-0011-R5b-SM-5KM44 36.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 35.3
GTEX-14BIM-0011-R5b-SM-5S2RM 35.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 35.1
GTEX-UTHO-0011-R5A-SM-3GIJD 35.1
GTEX-13FLW-0011-R5a-SM-5LZX6 34.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 33.8
GTEX-T6MN-0011-R5A-SM-32QPD 33.7
GTEX-11GSP-0011-R5a-SM-57WBE 33.5
GTEX-R55E-0011-R5A-SM-2TC5N 33.3
GTEX-11OF3-0011-R5a-SM-57WB4 33.2
GTEX-11NV4-0011-R5a-SM-5NQ88 33.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 32.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 31.9
GTEX-ZUA1-0011-R5b-SM-51MTG 31.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 31.7
GTEX-13OVL-0011-R5b-SM-5L3FU 31.7
GTEX-N7MT-0011-R5a-SM-2I3G6 31.4
GTEX-13FXS-0011-R5b-SM-5LZYE 31.3
GTEX-13OW6-0011-R5a-SM-5O9BK 31.2
GTEX-13X6I-0011-R5a-SM-5PNWW 31.1
GTEX-QMR6-0011-R5A-SM-32PKT 31.0
GTEX-11H98-0011-R5b-SM-57WCF 30.3
GTEX-RU72-0011-R5A-SM-2TF6U 30.2
GTEX-12WSB-0011-R5b-SM-5GU67 29.6
GTEX-RVPU-0011-R5A-SM-2XCAD 28.6
GTEX-T5JC-0011-R5A-SM-32PLK 28.2
GTEX-13OW7-0011-R5b-SM-5O9DM 27.9
GTEX-13S7M-0011-R5b-SM-5P9HS 27.6
GTEX-132Q8-0011-R5a-SM-5IJDM 26.9
GTEX-13X6K-0011-R5b-SM-5PNUE 26.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 26.6
GTEX-RVPV-0011-R5A-SM-2TF69 25.2
GTEX-TSE9-0011-R5A-SM-3DB7J 24.9
GTEX-12WSD-0011-R5b-SM-5CVNG 24.8
GTEX-12WSA-0011-R5b-SM-5GU5I 24.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 24.7
GTEX-13CZV-0011-R5a-SM-5K7XA 24.5
GTEX-13JUV-0011-R5a-SM-5LZY5 24.5
GTEX-13FLV-0011-R5a-SM-5LZWT 23.5
GTEX-14BIN-0011-R5b-SM-5SI78 23.2
GTEX-ZE7O-0011-R5a-SM-57WBO 22.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 22.5
GTEX-13NYB-0011-R5a-SM-5MR45 22.0
GTEX-YFC4-0011-R5a-SM-4RGLR 22.0
GTEX-XMD1-0011-R5A-SM-4AT47 21.9
GTEX-13OW5-0011-R5b-SM-5L3FR 21.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 21.6
GTEX-NL4W-0011-R5a-SM-2I3GD 21.5
GTEX-OHPN-0011-R5A-SM-2I5FF 21.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 21.4
GTEX-X4XX-0011-R5A-SM-46MWN 20.5
GTEX-ZXG5-0011-R5b-SM-57WBN 20.5
GTEX-13OVH-0011-R5b-SM-5KM4L 20.3
GTEX-NL3H-0011-R5a-SM-2I3GB 20.3
GTEX-13NYS-0011-R5a-SM-5MR4D 20.2
GTEX-XOTO-0011-R5A-SM-4B657 19.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 19.4
GTEX-12ZZX-0011-R5a-SM-5HL89 19.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 17.3
GTEX-144GO-0011-R5a-SM-5PNUR 17.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 17.3
GTEX-11WQC-0011-R5a-SM-5BC74 17.2
GTEX-13JVG-0011-R5a-SM-5MR4O 16.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 16.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 16.1
GTEX-139TS-0011-R5b-SM-5J2MZ 15.9
GTEX-OXRN-0011-R5A-SM-2I5EF 15.9
GTEX-YJ89-0011-R5a-SM-4V6GM 14.8
GTEX-13CIG-0011-R5b-SM-5L3F2 14.4
GTEX-ZVT3-0011-R5a-SM-51MSI 14.0
GTEX-NPJ7-0011-R5a-SM-33HBK 13.2
GTEX-X261-0011-R5A-SM-3NMB4 12.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 12.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 12.7
GTEX-ZV68-0011-R5a-SM-4YCDW 11.8
GTEX-12WSH-0011-R5b-SM-5P9F3 11.4
GTEX-13112-0011-R5b-SM-5DUV8 11.3
GTEX-1445S-0011-R5a-SM-5PNUS 10.9
GTEX-144GL-0011-R5b-SM-5PNUJ 10.2
GTEX-S7PM-0011-R5A-SM-3NM8G 9.7
GTEX-13FHP-0011-R5b-SM-5LZY2 8.8
GTEX-1477Z-0011-R5b-SM-5PNUO 8.5
GTEX-11UD1-0011-R5b-SM-5P9FP 7.8
GTEX-139T8-0011-R5b-SM-5J1MO 7.8
GTEX-13CF2-0011-R5a-SM-5LZWS 7.6
GTEX-145MG-0011-R5b-SM-5S2VU 5.0
GTEX-13NZA-0011-R5b-SM-5KM4K 4.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

113.4

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 113.4
FF:10379-105H1 89 years, female 147.4
FF:10164-103B2 76 years, female 79.4

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