We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
LAMTOR1
  • TISSUE

  • premium

    CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:31.3RPKM
FANTOM5:110.7Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA002997

 

Glial cells

Low  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

31.3

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 31.3
Samples: 117

Max RPKM: 58.4
Min RPKM: 17.6
Std RPKM: 5.5
Median RPKM: 30.9
GTEX-12WSA-0011-R5b-SM-5GU5I 58.4
GTEX-139T8-0011-R5b-SM-5J1MO 43.7
GTEX-ZUA1-0011-R5b-SM-51MTG 43.4
GTEX-139TT-0011-R5b-SM-5K7W8 43.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 40.7
GTEX-12WSB-0011-R5b-SM-5GU67 40.1
GTEX-11H98-0011-R5b-SM-57WCF 39.8
GTEX-13NYB-0011-R5a-SM-5MR45 39.7
GTEX-T6MN-0011-R5A-SM-32QPD 39.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 38.8
GTEX-13JUV-0011-R5a-SM-5LZY5 38.7
GTEX-13X6K-0011-R5b-SM-5PNUE 38.7
GTEX-T5JC-0011-R5A-SM-32PLK 38.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 38.5
GTEX-R55E-0011-R5A-SM-2TC5N 38.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 36.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 36.2
GTEX-14BIM-0011-R5b-SM-5S2RM 35.8
GTEX-RU72-0011-R5A-SM-2TF6U 35.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 35.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 35.5
GTEX-OHPN-0011-R5A-SM-2I5FF 35.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 35.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 35.0
GTEX-1399T-0011-R5b-SM-5IJDK 34.8
GTEX-NL4W-0011-R5a-SM-2I3GD 34.7
GTEX-11OF3-0011-R5a-SM-57WB4 34.5
GTEX-132Q8-0011-R5a-SM-5IJDM 34.4
GTEX-N7MS-0011-R5a-SM-2HMK8 34.2
GTEX-X585-0011-R5A-SM-46MVI 34.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 34.1
GTEX-12WSC-0011-R5b-SM-5CVNS 34.0
GTEX-145MH-0011-R5a-SM-5P9JT 34.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 33.8
GTEX-13FLV-0011-R5a-SM-5LZWT 33.3
GTEX-13FLW-0011-R5a-SM-5LZX6 33.2
GTEX-13NYS-0011-R5a-SM-5MR4D 33.2
GTEX-13FXS-0011-R5b-SM-5LZYE 33.1
GTEX-13JVG-0011-R5a-SM-5MR4O 33.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 32.8
GTEX-131YS-0011-R5b-SM-5K7YB 32.7
GTEX-RVPU-0011-R5A-SM-2XCAD 32.7
GTEX-X4XX-0011-R5A-SM-46MWN 32.6
GTEX-1313W-0011-R5b-SM-5L3EP 32.4
GTEX-144GO-0011-R5a-SM-5PNUR 32.2
GTEX-13CZV-0011-R5a-SM-5K7XA 32.1
GTEX-13G51-0011-R5a-SM-5L3EB 32.0
GTEX-N7MT-0011-R5a-SM-2I3G6 32.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 32.0
GTEX-QVJO-0011-R5A-SM-2S1QM 31.9
GTEX-13OVH-0011-R5b-SM-5KM4L 31.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 31.6
GTEX-P44H-0011-R5A-SM-2XCEX 31.4
GTEX-11NV4-0011-R5a-SM-5NQ88 31.3
GTEX-NPJ7-0011-R5a-SM-33HBK 31.3
GTEX-S7SE-0011-R5A-SM-2XCDA 31.0
GTEX-TSE9-0011-R5A-SM-3DB7J 31.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 30.9
GTEX-145LS-0011-R5a-SM-5SI65 30.9
GTEX-13X6I-0011-R5a-SM-5PNWW 30.8
GTEX-ZE7O-0011-R5a-SM-57WBO 30.8
GTEX-13OW7-0011-R5b-SM-5O9DM 30.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 30.6
GTEX-WVLH-0011-R5A-SM-3MJFW 30.6
GTEX-X261-0011-R5A-SM-3NMB4 30.6
GTEX-13OW6-0011-R5a-SM-5O9BK 30.3
GTEX-13VXU-0011-R5a-SM-5O9D7 30.2
GTEX-14ABY-0011-R5b-SM-5SI7B 29.9
GTEX-13SLX-0011-R5a-SM-5O9BV 29.7
GTEX-13O3O-0011-R5b-SM-5KM44 29.6
GTEX-WL46-0011-R5A-SM-3LK6V 29.5
GTEX-13X6J-0011-R5b-SM-5PNWT 29.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 29.3
GTEX-QMR6-0011-R5A-SM-32PKT 29.3
GTEX-XOTO-0011-R5A-SM-4B657 29.3
GTEX-11WQC-0011-R5a-SM-5BC74 29.2
GTEX-12ZZX-0011-R5a-SM-5HL89 29.2
GTEX-WZTO-0011-R5B-SM-3NMC5 29.1
GTEX-ZV68-0011-R5a-SM-4YCDW 28.9
GTEX-11GSP-0011-R5a-SM-57WBE 28.8
GTEX-12WSD-0011-R5b-SM-5CVNG 28.8
GTEX-13OVL-0011-R5b-SM-5L3FU 28.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 28.7
GTEX-WWYW-0011-R5A-SM-3NB3E 28.6
GTEX-13CIG-0011-R5b-SM-5L3F2 28.4
GTEX-13OW5-0011-R5b-SM-5L3FR 28.3
GTEX-YFC4-0011-R5a-SM-4RGLR 28.3
GTEX-RVPV-0011-R5A-SM-2TF69 28.2
GTEX-14BIN-0011-R5b-SM-5SI78 28.1
GTEX-UTHO-0011-R5A-SM-3GIJD 28.0
GTEX-ZXG5-0011-R5b-SM-57WBN 27.9
GTEX-1445S-0011-R5a-SM-5PNUS 27.7
GTEX-144GL-0011-R5b-SM-5PNUJ 27.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 27.4
GTEX-13FHP-0011-R5b-SM-5LZY2 27.1
GTEX-YJ89-0011-R5a-SM-4V6GM 27.0
GTEX-13112-0011-R5b-SM-5DUV8 26.6
GTEX-Z93S-0011-R5b-SM-4RGNI 26.3
GTEX-12WSF-0011-R5a-SM-5HL8K 26.1
GTEX-11UD1-0011-R5b-SM-5P9FP 26.0
GTEX-13S7M-0011-R5b-SM-5P9HS 25.6
GTEX-XMD1-0011-R5A-SM-4AT47 25.5
GTEX-12WSH-0011-R5b-SM-5P9F3 25.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 24.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 24.7
GTEX-ZVT3-0011-R5a-SM-51MSI 24.7
GTEX-139TS-0011-R5b-SM-5J2MZ 24.4
GTEX-PVOW-0011-R5A-SM-32PL7 24.3
GTEX-OXRN-0011-R5A-SM-2I5EF 24.1
GTEX-T2IS-0011-R5A-SM-32QP4 24.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 23.8
GTEX-13CF2-0011-R5a-SM-5LZWS 23.2
GTEX-NL3H-0011-R5a-SM-2I3GB 22.6
GTEX-S7PM-0011-R5A-SM-3NM8G 22.5
GTEX-145MG-0011-R5b-SM-5S2VU 21.6
GTEX-1477Z-0011-R5b-SM-5PNUO 21.3
GTEX-13NZA-0011-R5b-SM-5KM4K 17.6
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

110.7

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 110.7
FF:10164-103B2 76 years, female 111.4
FF:10379-105H1 89 years, female 110.0

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.