Expression of LYPD6B in cancer - Summary

CANCER ATLAS

Gene description

LY6/PLAUR domain containing 6B

Protein class

Predicted secreted proteins, Transporters

Protein evidence

Evidence at transcript level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA049239

GENE INFORMATION
Gene name	LYPD6B (HGNC Symbol)
Synonyms	CT116, LYPD7
Description	LY6/PLAUR domain containing 6B (HGNC Symbol)
Entrez gene summary
Chromosome	2
Cytoband	q23.2
Chromosome location (bp)	149038107 - 149215262
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000150556 (version 83.38)
Entrez gene	130576
UniProt	Q8NI32 (UniProt - Evidence at transcript level)
neXtProt	NX_Q8NI32
Antibodypedia	LYPD6B antibodies

PROTEIN BROWSER

LYPD6B-001	LYPD6B-002	LYPD6B-003	LYPD6B-008	LYPD6B-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
LYPD6B-001 ENSP00000387077 ENST00000409642	Q8NI32 [Direct mapping] Ly6/PLAUR domain-containing protein 6B Show all	Transporters Accessory Factors Involved in Transport MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005886 [plasma membrane] GO:0031225 [anchored component of membrane] Show all	207 aa 23.3 kDa	Yes	0
LYPD6B-002 ENSP00000386479 ENST00000409876	Q8NI32 [Direct mapping] Ly6/PLAUR domain-containing protein 6B Show all	Transporters Accessory Factors Involved in Transport MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005886 [plasma membrane] GO:0031225 [anchored component of membrane] Show all	183 aa 20.7 kDa	Yes	0
LYPD6B-003 ENSP00000386650 ENST00000409029	Q8NI32 [Direct mapping] Ly6/PLAUR domain-containing protein 6B Show all	Transporters Accessory Factors Involved in Transport MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005886 [plasma membrane] GO:0031225 [anchored component of membrane] Show all	183 aa 20.7 kDa	Yes	0
LYPD6B-008 ENSP00000412070 ENST00000450639	F8WCH4 [Direct mapping] Ly6/PLAUR domain-containing protein 6B Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all		74 aa 8.5 kDa	Yes	0
LYPD6B-201 ENSP00000280115 ENST00000280115	H7BXI7 [Direct mapping] Ly6/PLAUR domain-containing protein 6B Show all	MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all		183 aa 20.7 kDa	Yes	0