Tissue expression of OXSM - Summary - The Human Protein Atlas

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OXSM

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TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	OXSM
Gene description	3-oxoacyl-ACP synthase, mitochondrial
Protein class	Enzymes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	5
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Expressed in all
GTEx:	Expressed in all
FANTOM5:	Expressed in all

Protein evidence

Evidence at protein level

Protein expression

Cytoplasmic expression with a granular pattern in all tissues.

DATA RELIABILITY
Data reliability description	Antibody staining consistent with RNA expression data.
Reliability score	Supported based on 3 antibodies. HPA021293 , HPA021300 , HPA021337
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
GTEx dataset Organ Expression Alphabetical RNA tissue category: Expressed in all
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Expressed in all

GENE INFORMATION
Gene name	OXSM (HGNC Symbol)
Synonyms	FASN2D, FLJ20604, KS
Description	3-oxoacyl-ACP synthase, mitochondrial (HGNC Symbol)
Entrez gene summary	This gene encodes a beta-ketoacyl synthetase. The encoded enzyme is required for elongation of fatty acid chains in the mitochondria. Alternatively spliced transcript variants have been described.[provided by RefSeq, Feb 2009]
Chromosome	3
Cytoband	p24.2
Chromosome location (bp)	25782917 - 25794534
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000151093 (version 83.38)
Entrez gene	54995
UniProt	Q9NWU1 (UniProt - Evidence at protein level)
neXtProt	NX_Q9NWU1
Antibodypedia	OXSM antibodies

PROTEIN BROWSER

OXSM-001	OXSM-003	OXSM-004	OXSM-007	OXSM-201

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
OXSM-001 ENSP00000280701 ENST00000280701	Q9NWU1 [Direct mapping] 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial A0A024R2Q9 [Target identity:100%; Query identity:100%] 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial Show all	Enzymes ENZYME proteins Transferases SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003824 [catalytic activity] GO:0004315 [3-oxoacyl-[acyl-carrier-protein] synthase activity] GO:0005737 [cytoplasm] GO:0005739 [mitochondrion] GO:0006633 [fatty acid biosynthetic process] GO:0006637 [acyl-CoA metabolic process] GO:0008152 [metabolic process] GO:0016747 [transferase activity, transferring acyl groups other than amino-acyl groups] GO:0051790 [short-chain fatty acid biosynthetic process] GO:0051792 [medium-chain fatty acid biosynthetic process] Show all	459 aa 48.8 kDa	No	0
OXSM-003 ENSP00000411303 ENST00000420173	Q9NWU1 [Direct mapping] 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial Show all	Enzymes ENZYME proteins Transferases SPOCTOPUS predicted membrane proteins Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0003824 [catalytic activity] GO:0004315 [3-oxoacyl-[acyl-carrier-protein] synthase activity] GO:0005737 [cytoplasm] GO:0005739 [mitochondrion] GO:0006633 [fatty acid biosynthetic process] GO:0006637 [acyl-CoA metabolic process] GO:0008152 [metabolic process] GO:0016747 [transferase activity, transferring acyl groups other than amino-acyl groups] GO:0051790 [short-chain fatty acid biosynthetic process] GO:0051792 [medium-chain fatty acid biosynthetic process] Show all	376 aa 40 kDa	No	0
OXSM-004 ENSP00000392334 ENST00000452098	C9J2G3 [Direct mapping] 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003824 [catalytic activity] GO:0008152 [metabolic process] Show all	220 aa 23.6 kDa	No	0
OXSM-007 ENSP00000409817 ENST00000428266	C9JQQ2 [Direct mapping] 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003824 [catalytic activity] GO:0008152 [metabolic process] Show all	231 aa 24.8 kDa	No	0
OXSM-201 ENSP00000487031 ENST00000626005	F8VNS3 [Direct mapping] 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0003824 [catalytic activity] GO:0008152 [metabolic process] Show all	102 aa 11.2 kDa	No	0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.