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VTI1A

GENERAL INFORMATION

Gene name

 VTI1A

Gene description

 Vesicle transport through interaction with t-SNAREs 1A

Protein class

 Cancer-related genes
Predicted intracellular proteins
Predicted membrane proteins

Predicted localization

 Intracellular,Membrane

Number of transcripts

 2
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Mixed
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

 Evidence at protein level

Protein expression

 General cytoplasmic expression with a granular pattern.

DATA RELIABILITY

Data reliability
description

 Antibody staining mainly consistent with RNA expression data.

Reliability score

 Supported based on 1 antibody.
HPA054108
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RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
Caudate
N/A
Endocrine tissues
Bone marrow & immune system
Muscle tissues
Lung
Bronchus
N/A
Liver & gallbladder
Pancreas
Gastrointestinal tract
Kidney & urinary bladder
Male tissues
Female tissues
Vagina
N/A
Adipose & soft tissue
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Mixed
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all

GENE INFORMATION

Gene name

 VTI1A (HGNC Symbol)

Synonyms

 MVti1, Vti1-rp2, Vti1a

Description

 Vesicle transport through interaction with t-SNAREs 1A (HGNC Symbol)

Entrez gene summary

Chromosome

 10

Cytoband

 q25.2

Chromosome location (bp)

 112446998 - 112818744

Protein evidence

 Evidence at protein level (all genes)

Ensembl

 ENSG00000151532 (version 83.38)

Entrez gene

 143187

UniProt

 Q96AJ9 (UniProt - Evidence at protein level)

neXtProt

 NX_Q96AJ9

Antibodypedia

 VTI1A antibodies

PROTEIN BROWSER
VTI1A-001
VTI1A-009

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
VTI1A-001
ENSP00000376792
ENST00000393077
Q96AJ9 [Direct mapping]
Vesicle transport through interaction with t-SNAREs homolog 1A
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0000149 [SNARE binding]
GO:0005484 [SNAP receptor activity]
GO:0005515 [protein binding]
GO:0005768 [endosome]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005794 [Golgi apparatus]
GO:0006623 [protein targeting to vacuole]
GO:0006886 [intracellular protein transport]
GO:0006888 [ER to Golgi vesicle-mediated transport]
GO:0006891 [intra-Golgi vesicle-mediated transport]
GO:0006896 [Golgi to vacuole transport]
GO:0008021 [synaptic vesicle]
GO:0012507 [ER to Golgi transport vesicle membrane]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030136 [clathrin-coated vesicle]
GO:0031201 [SNARE complex]
GO:0031902 [late endosome membrane]
GO:0042147 [retrograde transport, endosome to Golgi]
GO:0043025 [neuronal cell body]
GO:0044306 [neuron projection terminus]
GO:0048280 [vesicle fusion with Golgi apparatus]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050882 [voluntary musculoskeletal movement]
GO:0090161 [Golgi ribbon formation]
Show all
 217 aa
25.2 kDa 		No 1
VTI1A-009
ENSP00000395017
ENST00000432306
Q96AJ9 [Direct mapping]
Vesicle transport through interaction with t-SNAREs homolog 1A
Show all
Predicted intracellular proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0000149 [SNARE binding]
GO:0005484 [SNAP receptor activity]
GO:0005515 [protein binding]
GO:0005768 [endosome]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005794 [Golgi apparatus]
GO:0006623 [protein targeting to vacuole]
GO:0006886 [intracellular protein transport]
GO:0006888 [ER to Golgi vesicle-mediated transport]
GO:0006891 [intra-Golgi vesicle-mediated transport]
GO:0006896 [Golgi to vacuole transport]
GO:0008021 [synaptic vesicle]
GO:0012507 [ER to Golgi transport vesicle membrane]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030136 [clathrin-coated vesicle]
GO:0031201 [SNARE complex]
GO:0031902 [late endosome membrane]
GO:0042147 [retrograde transport, endosome to Golgi]
GO:0043025 [neuronal cell body]
GO:0044306 [neuron projection terminus]
GO:0048280 [vesicle fusion with Golgi apparatus]
GO:0048471 [perinuclear region of cytoplasm]
GO:0050882 [voluntary musculoskeletal movement]
GO:0090161 [Golgi ribbon formation]
Show all
 203 aa
23.4 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.