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Term
Gene name

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Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

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Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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PABPC3
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TISSUE ATLAS PRIMARY DATA TESTIS

GENE/PROTEIN

Antibody validation


Dictionary

Testis

Tissue proteome

Testis

TESTIS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:60.2TPM
GTEx:29.8RPKM
FANTOM5:118.1Tags Per Million

TESTIS - Annotated protein expression

Annotated protein
expression

Cells in seminiferous ducts:High
Leydig cells:Low
 

Antibody staining

Antibody HPA045423

 

Cells in seminiferous ducts

High  

Leydig cells

Low  
 
 
 

TESTIS - HPA RNA-seq

Average TPM

60.2

overview Male, age 56
Sample 1
TPM: 25.7
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 2
TPM: 61.2
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25
overview Male, age 62
Sample 3
TPM: 57.6
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 34
Sample 4
TPM: 26.5
Cell types%
Cells in seminiferous ducts: 60
Other cell types: 40
overview Male, age 26
Sample 5
TPM: 78.5
Cell types%
Cells in seminiferous ducts: 55
Other cell types: 45
overview Male, age 50
Sample 6
TPM: 73.5
Cell types%
Cells in seminiferous ducts: 85
Other cell types: 15
overview Male, age 37
Sample 7
TPM: 47.4
Cell types%
Cells in seminiferous ducts: 35
Other cell types: 65
overview Male, age 51
Sample 8
TPM: 88.1
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 9
TPM: 64.8
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 26
Sample 10
TPM: 79.1
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25

TESTIS - GTEx RNA-seq

Average RPKM

29.8

GTEx sample id

RPKM

 

Testis

Testis
RPKM: 29.8
Samples: 172

Max RPKM: 53.5
Min RPKM: 8
Std RPKM: 9.9
Median RPKM: 29.4
GTEX-11WQC-2326-SM-5EQKE 53.5
GTEX-13OVL-0426-SM-5IFG6 51.2
GTEX-111VG-1926-SM-5GIDO 50.5
GTEX-ZYT6-2726-SM-5GICP 49.9
GTEX-139TS-1726-SM-5IJG5 48.6
GTEX-117YW-1526-SM-5EGGP 48.3
GTEX-14ABY-0626-SM-5Q5C9 47.9
GTEX-13112-0226-SM-5P9IV 47.0
GTEX-TKQ2-1526-SM-4DXUN 46.8
GTEX-ZTSS-1526-SM-51MTC 46.3
GTEX-Z93S-1726-SM-5HL8G 46.2
GTEX-ZVTK-0126-SM-57WDG 46.0
GTEX-13VXU-0726-SM-5J2O7 45.9
GTEX-WK11-0326-SM-4OOS6 45.9
GTEX-139TT-2226-SM-5LZWO 45.8
GTEX-13FHP-2826-SM-5IJFW 45.1
GTEX-Y111-2426-SM-4TT23 44.7
GTEX-13N1W-2626-SM-5IJEP 44.6
GTEX-QEG4-0126-SM-48TZE 44.3
GTEX-117XS-2026-SM-5GID1 43.6
GTEX-13FLW-2126-SM-5N9FD 42.7
GTEX-REY6-0126-SM-48FDT 42.1
GTEX-11EQ8-1426-SM-5EGJR 42.0
GTEX-144GM-0426-SM-5Q5C8 41.6
GTEX-Q2AI-1226-SM-48U14 41.5
GTEX-S7PM-0626-SM-4AD4Q 40.8
GTEX-145MO-0126-SM-5S2QU 40.7
GTEX-144GL-0726-SM-5LU4P 40.1
GTEX-R55E-0726-SM-48FCZ 40.0
GTEX-V1D1-2126-SM-4JBH4 40.0
GTEX-11ZUS-2726-SM-5FQUA 39.8
GTEX-11EQ9-1926-SM-5PNVV 39.4
GTEX-12WSH-0326-SM-5GCNH 38.9
GTEX-12ZZY-0126-SM-5LZV2 38.9
GTEX-11DXZ-2126-SM-59881 38.8
GTEX-OXRL-2126-SM-3NM98 38.2
GTEX-ZPU1-2126-SM-57WED 38.1
GTEX-T6MN-2026-SM-4DM7L 38.0
GTEX-XQ3S-2726-SM-4BOP2 37.7
GTEX-11NV4-1726-SM-5N9FC 37.6
GTEX-11GS4-2026-SM-5N9CP 37.5
GTEX-12WSL-2326-SM-5DUXQ 37.4
GTEX-U4B1-1526-SM-4DXSL 37.1
GTEX-ZZ64-1126-SM-5GZXY 36.5
GTEX-132QS-1226-SM-5P9GD 36.4
GTEX-XGQ4-2026-SM-4AT6G 36.4
GTEX-ZT9W-2226-SM-57WFU 36.4
GTEX-145MH-2326-SM-5O9AW 35.8
GTEX-OIZH-2126-SM-3NB1P 35.4
GTEX-131XE-0426-SM-5IJF4 35.3
GTEX-ZQUD-2026-SM-51MSM 35.2
GTEX-TKQ1-0926-SM-4DXU2 35.1
GTEX-1212Z-0326-SM-5FQSJ 35.0
GTEX-ZV7C-2026-SM-5NQ8F 34.6
GTEX-N7MS-0126-SM-3TW8O 34.4
GTEX-ZVZP-2226-SM-57WBF 34.3
GTEX-OOBK-2126-SM-3LK5T 33.9
GTEX-XBEC-0126-SM-4GIDT 33.2
GTEX-YEC3-1726-SM-5IFIK 33.1
GTEX-ZAB5-2426-SM-5CVMW 33.1
GTEX-ZDYS-1326-SM-5IJFF 32.9
GTEX-WHSB-2126-SM-4M1XF 32.7
GTEX-12C56-1426-SM-5FQSW 32.6
GTEX-QEG5-0126-SM-4R1JR 32.6
GTEX-XAJ8-1326-SM-47JYT 32.5
GTEX-12WSI-2126-SM-5GCMV 32.4
GTEX-111CU-1726-SM-5EGHM 31.8
GTEX-S4Q7-1226-SM-4AD5I 31.7
GTEX-11P82-1526-SM-5BC5M 31.6
GTEX-X5EB-2026-SM-4E3KA 31.4
GTEX-ZA64-1626-SM-5CVME 31.3
GTEX-XLM4-1526-SM-4AT6D 31.2
GTEX-OHPM-2126-SM-3LK75 31.0
GTEX-S7SE-0326-SM-4AT5Q 30.9
GTEX-13NZB-2026-SM-5MR4M 30.7
GTEX-XBED-2026-SM-4AT5D 30.4
GTEX-11EI6-2226-SM-5EGJM 30.2
GTEX-YFCO-1726-SM-4W21S 30.2
GTEX-YEC4-1526-SM-4W1YU 30.1
GTEX-11NUK-2626-SM-5A5MB 30.0
GTEX-UPJH-0126-SM-4IHLL 29.9
GTEX-139T6-1226-SM-5IFFC 29.8
GTEX-147JS-0126-SM-5S2TW 29.6
GTEX-WZTO-0326-SM-4PQYZ 29.6
GTEX-ZYFC-0126-SM-5GIEH 29.6
GTEX-13OW5-2526-SM-5L3I1 29.5
GTEX-SNOS-1126-SM-4DM67 29.4
GTEX-T8EM-0126-SM-4DM5R 29.4
GTEX-PW2O-1426-SM-48TCD 29.2
GTEX-WH7G-1926-SM-4LVMM 29.1
GTEX-12696-0226-SM-5EGL3 28.6
GTEX-S3XE-1526-SM-4AD5A 28.6
GTEX-SNMC-1026-SM-4DM7K 27.8
GTEX-13NYB-2226-SM-5MR58 27.7
GTEX-QV31-1126-SM-4R1K4 27.7
GTEX-11TUW-2226-SM-5EQL9 27.6
GTEX-U8T8-1126-SM-4DXUE 27.5
GTEX-13O21-1226-SM-5J2MK 27.4
GTEX-Q2AH-1526-SM-48TZG 27.3
GTEX-11LCK-2326-SM-5HL53 27.1
GTEX-13111-1526-SM-5EGJX 27.1
GTEX-S95S-1126-SM-4B64E 27.0
GTEX-ZUA1-2726-SM-59HLJ 27.0
GTEX-11NSD-1026-SM-5N9BE 26.9
GTEX-RM2N-1326-SM-48FCW 26.6
GTEX-11OF3-1826-SM-5987N 26.5
GTEX-S33H-0126-SM-4AD62 26.4
GTEX-U8XE-0126-SM-4E3I3 26.1
GTEX-WFG8-1926-SM-4LVM1 26.1
GTEX-XMK1-2026-SM-4B65K 25.9
GTEX-Y5V6-1726-SM-4VDSZ 25.9
GTEX-ZT9X-1426-SM-5DUX1 25.8
GTEX-QLQW-1026-SM-447A9 25.7
GTEX-111YS-2026-SM-5EGGL 25.6
GTEX-13O61-2026-SM-5J2M6 25.5
GTEX-14753-0626-SM-5Q5CY 25.5
GTEX-T5JC-0726-SM-4DM55 25.4
GTEX-111FC-1926-SM-5GZYC 25.2
GTEX-YF7O-2026-SM-4W1YE 25.1
GTEX-13N2G-0126-SM-5N9DV 24.8
GTEX-R55C-1426-SM-48FED 24.7
GTEX-V955-1926-SM-4KL1L 24.5
GTEX-11O72-0726-SM-5P9GO 24.4
GTEX-RUSQ-2126-SM-47JXK 24.4
GTEX-144GN-1626-SM-5Q5BU 24.3
GTEX-YJ89-0626-SM-4TT3Z 24.2
GTEX-12WSM-1326-SM-5GCP9 24.1
GTEX-WOFM-1126-SM-4OOSB 24.1
GTEX-WVLH-2626-SM-4MVNV 24.1
GTEX-13NZA-2526-SM-5IJFX 24.0
GTEX-RWSA-2426-SM-47JXR 24.0
GTEX-X3Y1-2626-SM-4PQZI 23.7
GTEX-RN64-2326-SM-48FDW 23.3
GTEX-11P7K-1026-SM-5HL6Y 23.2
GTEX-SUCS-1326-SM-4DM5T 22.1
GTEX-X261-2326-SM-4PQYU 21.9
GTEX-11TT1-2226-SM-5GU6B 21.7
GTEX-R55D-0126-SM-48FEL 21.1
GTEX-13O1R-0726-SM-5IJEI 20.7
GTEX-145LT-0426-SM-5LUAP 20.7
GTEX-QMRM-1526-SM-4R1K6 20.0
GTEX-13OW6-0126-SM-5IJGM 19.9
GTEX-ZTX8-1126-SM-51MRM 19.9
GTEX-1399R-1626-SM-5P9GG 19.7
GTEX-U3ZM-1626-SM-4DXSK 19.4
GTEX-P4QS-2126-SM-3NMCF 19.2
GTEX-OOBJ-2126-SM-3NB1N 19.1
GTEX-P4QR-0226-SM-3NMCH 18.2
GTEX-U3ZH-1526-SM-4DXV1 18.2
GTEX-14A6H-2326-SM-5Q5B5 18.1
GTEX-13OVH-0726-SM-5N9BU 17.8
GTEX-VJYA-1426-SM-4KL1Y 17.6
GTEX-NFK9-0126-SM-3LK5H 16.8
GTEX-QV44-1726-SM-4R1KG 16.7
GTEX-QLQ7-1426-SM-4R1JX 16.6
GTEX-13FTW-1326-SM-5LZZD 16.1
GTEX-O5YT-2126-SM-3MJGD 16.1
GTEX-OIZI-0126-SM-3NB13 15.9
GTEX-YB5E-1926-SM-5IFIG 15.6
GTEX-1339X-1926-SM-5PNVP 14.3
GTEX-Y8E4-2226-SM-5LU94 14.1
GTEX-PLZ5-1526-SM-3P5ZX 13.7
GTEX-XPT6-1626-SM-4B655 13.3
GTEX-11ONC-2226-SM-5HL6D 12.5
GTEX-11WQK-2826-SM-5EQKH 12.3
GTEX-1399Q-2826-SM-5IJEZ 12.2
GTEX-WFON-2026-SM-4LVMW 11.3
GTEX-Y9LG-1726-SM-4VBQE 10.9
GTEX-ZDTT-2026-SM-5K7TY 10.8
GTEX-147F4-0626-SM-5LUAK 10.5
GTEX-XPVG-2226-SM-4B65U 8.9
GTEX-ZAB4-0126-SM-5CVMG 8.0
Show all

TESTIS - FANTOM5 CAGE

Average Tags Per Million

118.1

FANTOM5 sample id

Sample description

Tags Per Million

Testis
Tags Per Million: 118.1
FF:10026-101D8 34,53,86 years, male 119.9
FF:10096-102C6 14-64 years, male 116.3

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