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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:66.8RPKM
FANTOM5:70.9Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Low
Neuronal cells:Medium
 

Antibody staining

Antibody HPA052623

 

Glial cells

Low  

Neuronal cells

Medium  
 
 
 

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

66.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 66.8
Samples: 117

Max RPKM: 172.9
Min RPKM: 27.7
Std RPKM: 20.3
Median RPKM: 64.8
GTEX-139TT-0011-R5b-SM-5K7W8 172.9
GTEX-12WSA-0011-R5b-SM-5GU5I 133.2
GTEX-ZUA1-0011-R5b-SM-51MTG 118.7
GTEX-13NYB-0011-R5a-SM-5MR45 109.6
GTEX-X585-0011-R5A-SM-46MVI 109.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 103.9
GTEX-139T8-0011-R5b-SM-5J1MO 97.4
GTEX-13X6K-0011-R5b-SM-5PNUE 93.5
GTEX-12WSC-0011-R5b-SM-5CVNS 91.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 90.6
GTEX-T6MN-0011-R5A-SM-32QPD 89.6
GTEX-1399T-0011-R5b-SM-5IJDK 89.5
GTEX-12WSB-0011-R5b-SM-5GU67 87.5
GTEX-132Q8-0011-R5a-SM-5IJDM 85.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 85.4
GTEX-13JUV-0011-R5a-SM-5LZY5 85.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 83.7
GTEX-TSE9-0011-R5A-SM-3DB7J 83.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 82.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 80.4
GTEX-145MH-0011-R5a-SM-5P9JT 80.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 79.0
GTEX-14BIM-0011-R5b-SM-5S2RM 78.0
GTEX-13JVG-0011-R5a-SM-5MR4O 77.5
GTEX-11H98-0011-R5b-SM-57WCF 77.3
GTEX-1313W-0011-R5b-SM-5L3EP 76.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 76.2
GTEX-13FLV-0011-R5a-SM-5LZWT 75.5
GTEX-12WSH-0011-R5b-SM-5P9F3 75.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 74.9
GTEX-13CIG-0011-R5b-SM-5L3F2 74.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 74.6
GTEX-ZE7O-0011-R5a-SM-57WBO 74.1
GTEX-11NV4-0011-R5a-SM-5NQ88 74.0
GTEX-X4XX-0011-R5A-SM-46MWN 74.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 73.8
GTEX-11OF3-0011-R5a-SM-57WB4 73.5
GTEX-13FXS-0011-R5b-SM-5LZYE 72.4
GTEX-T5JC-0011-R5A-SM-32PLK 72.3
GTEX-11GSP-0011-R5a-SM-57WBE 71.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 71.4
GTEX-13NYS-0011-R5a-SM-5MR4D 71.0
GTEX-13FLW-0011-R5a-SM-5LZX6 70.4
GTEX-WL46-0011-R5A-SM-3LK6V 70.3
GTEX-12WSD-0011-R5b-SM-5CVNG 69.7
GTEX-OHPN-0011-R5A-SM-2I5FF 69.2
GTEX-XMD1-0011-R5A-SM-4AT47 69.2
GTEX-13G51-0011-R5a-SM-5L3EB 68.9
GTEX-YJ89-0011-R5a-SM-4V6GM 68.9
GTEX-Z93S-0011-R5b-SM-4RGNI 68.3
GTEX-13CZV-0011-R5a-SM-5K7XA 66.7
GTEX-WWYW-0011-R5A-SM-3NB3E 66.6
GTEX-XOTO-0011-R5A-SM-4B657 66.3
GTEX-11WQC-0011-R5a-SM-5BC74 66.2
GTEX-12WSF-0011-R5a-SM-5HL8K 65.4
GTEX-13VXU-0011-R5a-SM-5O9D7 65.3
GTEX-12ZZX-0011-R5a-SM-5HL89 64.9
GTEX-131YS-0011-R5b-SM-5K7YB 64.9
GTEX-13X6I-0011-R5a-SM-5PNWW 64.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 64.7
GTEX-RVPV-0011-R5A-SM-2TF69 64.6
GTEX-13OVH-0011-R5b-SM-5KM4L 64.3
GTEX-N7MT-0011-R5a-SM-2I3G6 64.2
GTEX-145LS-0011-R5a-SM-5SI65 64.1
GTEX-13O3O-0011-R5b-SM-5KM44 63.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 63.9
GTEX-R55E-0011-R5A-SM-2TC5N 63.7
GTEX-N7MS-0011-R5a-SM-2HMK8 63.4
GTEX-WVLH-0011-R5A-SM-3MJFW 63.0
GTEX-RU72-0011-R5A-SM-2TF6U 62.9
GTEX-ZV68-0011-R5a-SM-4YCDW 62.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 62.2
GTEX-13SLX-0011-R5a-SM-5O9BV 62.0
GTEX-X261-0011-R5A-SM-3NMB4 61.5
GTEX-14ABY-0011-R5b-SM-5SI7B 60.5
GTEX-144GO-0011-R5a-SM-5PNUR 59.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 59.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 59.1
GTEX-13OW7-0011-R5b-SM-5O9DM 58.5
GTEX-13X6J-0011-R5b-SM-5PNWT 58.3
GTEX-WZTO-0011-R5B-SM-3NMC5 57.9
GTEX-RVPU-0011-R5A-SM-2XCAD 57.8
GTEX-13S7M-0011-R5b-SM-5P9HS 57.5
GTEX-13OW5-0011-R5b-SM-5L3FR 57.4
GTEX-NL3H-0011-R5a-SM-2I3GB 57.2
GTEX-QVJO-0011-R5A-SM-2S1QM 56.8
GTEX-13OW6-0011-R5a-SM-5O9BK 55.8
GTEX-YFC4-0011-R5a-SM-4RGLR 55.8
GTEX-ZXG5-0011-R5b-SM-57WBN 55.6
GTEX-13OVL-0011-R5b-SM-5L3FU 55.5
GTEX-S7SE-0011-R5A-SM-2XCDA 54.0
GTEX-139TS-0011-R5b-SM-5J2MZ 53.7
GTEX-UTHO-0011-R5A-SM-3GIJD 52.6
GTEX-14BIN-0011-R5b-SM-5SI78 52.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 50.7
GTEX-ZVT3-0011-R5a-SM-51MSI 50.7
GTEX-WHSE-0011-R5A-SM-3P5ZO 50.2
GTEX-NL4W-0011-R5a-SM-2I3GD 49.8
GTEX-13112-0011-R5b-SM-5DUV8 48.3
GTEX-13CF2-0011-R5a-SM-5LZWS 46.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 45.8
GTEX-11UD1-0011-R5b-SM-5P9FP 45.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 44.6
GTEX-13FHP-0011-R5b-SM-5LZY2 44.4
GTEX-QMR6-0011-R5A-SM-32PKT 43.2
GTEX-1445S-0011-R5a-SM-5PNUS 43.0
GTEX-NPJ7-0011-R5a-SM-33HBK 42.7
GTEX-P44H-0011-R5A-SM-2XCEX 42.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 41.8
GTEX-144GL-0011-R5b-SM-5PNUJ 40.8
GTEX-S7PM-0011-R5A-SM-3NM8G 38.1
GTEX-145MG-0011-R5b-SM-5S2VU 37.9
GTEX-OXRN-0011-R5A-SM-2I5EF 37.7
GTEX-1477Z-0011-R5b-SM-5PNUO 35.2
GTEX-T2IS-0011-R5A-SM-32QP4 30.5
GTEX-13NZA-0011-R5b-SM-5KM4K 30.1
GTEX-PVOW-0011-R5A-SM-32PL7 27.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

70.9

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 70.9
FF:10164-103B2 76 years, female 77.8
FF:10379-105H1 89 years, female 64.1

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