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TISSUE ATLAS PRIMARY DATA CAUDATE
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:170.8RPKM
FANTOM5:286.5Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:Medium
 

Antibody staining

Antibody HPA035097

 

Antibody CAB010753

 

Glial cells

High   Medium  

Neuronal cells

Not detected   Medium  
   
   
   

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

170.8

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 170.8
Samples: 117

Max RPKM: 491.7
Min RPKM: 12.9
Std RPKM: 89.8
Median RPKM: 152.3
GTEX-XMD1-0011-R5A-SM-4AT47 491.7
GTEX-12WSA-0011-R5b-SM-5GU5I 477.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 452.1
GTEX-12WSB-0011-R5b-SM-5GU67 442.9
GTEX-144GO-0011-R5a-SM-5PNUR 403.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 313.7
GTEX-X261-0011-R5A-SM-3NMB4 304.4
GTEX-RU72-0011-R5A-SM-2TF6U 299.8
GTEX-13X6I-0011-R5a-SM-5PNWW 293.3
GTEX-11H98-0011-R5b-SM-57WCF 285.7
GTEX-1445S-0011-R5a-SM-5PNUS 285.0
GTEX-ZV68-0011-R5a-SM-4YCDW 275.5
GTEX-13OW6-0011-R5a-SM-5O9BK 271.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 271.1
GTEX-13JUV-0011-R5a-SM-5LZY5 269.9
GTEX-13CIG-0011-R5b-SM-5L3F2 261.2
GTEX-13JVG-0011-R5a-SM-5MR4O 261.2
GTEX-13CZV-0011-R5a-SM-5K7XA 252.4
GTEX-14BIM-0011-R5b-SM-5S2RM 252.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 246.3
GTEX-13NYS-0011-R5a-SM-5MR4D 245.4
GTEX-11WQC-0011-R5a-SM-5BC74 241.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 236.2
GTEX-NL3H-0011-R5a-SM-2I3GB 232.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 229.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 227.9
GTEX-N7MT-0011-R5a-SM-2I3G6 225.8
GTEX-QVJO-0011-R5A-SM-2S1QM 225.5
GTEX-132Q8-0011-R5a-SM-5IJDM 225.0
GTEX-11GSP-0011-R5a-SM-57WBE 224.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 216.2
GTEX-13FLV-0011-R5a-SM-5LZWT 214.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 213.2
GTEX-OXRN-0011-R5A-SM-2I5EF 209.3
GTEX-ZXG5-0011-R5b-SM-57WBN 208.8
GTEX-139TT-0011-R5b-SM-5K7W8 204.7
GTEX-ZVT3-0011-R5a-SM-51MSI 201.5
GTEX-139TS-0011-R5b-SM-5J2MZ 196.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 190.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 182.2
GTEX-X4XX-0011-R5A-SM-46MWN 181.5
GTEX-ZE7O-0011-R5a-SM-57WBO 179.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 179.0
GTEX-13OW5-0011-R5b-SM-5L3FR 176.6
GTEX-13OVL-0011-R5b-SM-5L3FU 175.9
GTEX-OHPN-0011-R5A-SM-2I5FF 172.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 171.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 166.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 165.4
GTEX-S7PM-0011-R5A-SM-3NM8G 164.7
GTEX-131YS-0011-R5b-SM-5K7YB 162.5
GTEX-13G51-0011-R5a-SM-5L3EB 161.1
GTEX-WVLH-0011-R5A-SM-3MJFW 159.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 157.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 157.1
GTEX-13S7M-0011-R5b-SM-5P9HS 156.7
GTEX-12WSD-0011-R5b-SM-5CVNG 154.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 152.4
GTEX-NPJ7-0011-R5a-SM-33HBK 152.3
GTEX-1477Z-0011-R5b-SM-5PNUO 151.9
GTEX-11UD1-0011-R5b-SM-5P9FP 151.3
GTEX-T6MN-0011-R5A-SM-32QPD 147.1
GTEX-NL4W-0011-R5a-SM-2I3GD 145.5
GTEX-S7SE-0011-R5A-SM-2XCDA 143.7
GTEX-P44H-0011-R5A-SM-2XCEX 142.9
GTEX-QMR6-0011-R5A-SM-32PKT 139.9
GTEX-12ZZX-0011-R5a-SM-5HL89 139.3
GTEX-13OVH-0011-R5b-SM-5KM4L 139.2
GTEX-RVPV-0011-R5A-SM-2TF69 137.9
GTEX-11OF3-0011-R5a-SM-57WB4 135.4
GTEX-13X6K-0011-R5b-SM-5PNUE 134.8
GTEX-13OW7-0011-R5b-SM-5O9DM 134.4
GTEX-TSE9-0011-R5A-SM-3DB7J 134.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 133.0
GTEX-ZUA1-0011-R5b-SM-51MTG 130.7
GTEX-YFC4-0011-R5a-SM-4RGLR 128.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 127.5
GTEX-R55E-0011-R5A-SM-2TC5N 127.2
GTEX-13112-0011-R5b-SM-5DUV8 126.3
GTEX-13CF2-0011-R5a-SM-5LZWS 125.0
GTEX-13X6J-0011-R5b-SM-5PNWT 123.6
GTEX-UTHO-0011-R5A-SM-3GIJD 122.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 121.7
GTEX-145LS-0011-R5a-SM-5SI65 119.1
GTEX-XOTO-0011-R5A-SM-4B657 117.5
GTEX-13VXU-0011-R5a-SM-5O9D7 113.4
GTEX-RVPU-0011-R5A-SM-2XCAD 111.4
GTEX-13FLW-0011-R5a-SM-5LZX6 110.7
GTEX-14BIN-0011-R5b-SM-5SI78 110.0
GTEX-145MG-0011-R5b-SM-5S2VU 109.9
GTEX-12WSH-0011-R5b-SM-5P9F3 107.4
GTEX-WZTO-0011-R5B-SM-3NMC5 106.6
GTEX-12WSC-0011-R5b-SM-5CVNS 105.9
GTEX-13FXS-0011-R5b-SM-5LZYE 104.2
GTEX-YJ89-0011-R5a-SM-4V6GM 97.8
GTEX-PVOW-0011-R5A-SM-32PL7 95.3
GTEX-139T8-0011-R5b-SM-5J1MO 94.9
GTEX-14ABY-0011-R5b-SM-5SI7B 94.0
GTEX-13SLX-0011-R5a-SM-5O9BV 92.8
GTEX-1399T-0011-R5b-SM-5IJDK 88.7
GTEX-144GL-0011-R5b-SM-5PNUJ 87.0
GTEX-13NYB-0011-R5a-SM-5MR45 86.7
GTEX-WWYW-0011-R5A-SM-3NB3E 82.8
GTEX-N7MS-0011-R5a-SM-2HMK8 82.1
GTEX-1313W-0011-R5b-SM-5L3EP 72.2
GTEX-13NZA-0011-R5b-SM-5KM4K 71.9
GTEX-T2IS-0011-R5A-SM-32QP4 70.7
GTEX-T5JC-0011-R5A-SM-32PLK 67.4
GTEX-145MH-0011-R5a-SM-5P9JT 64.9
GTEX-13O3O-0011-R5b-SM-5KM44 60.3
GTEX-12WSF-0011-R5a-SM-5HL8K 58.9
GTEX-11NV4-0011-R5a-SM-5NQ88 57.9
GTEX-WHSE-0011-R5A-SM-3P5ZO 55.9
GTEX-13FHP-0011-R5b-SM-5LZY2 52.5
GTEX-WL46-0011-R5A-SM-3LK6V 42.9
GTEX-X585-0011-R5A-SM-46MVI 23.5
GTEX-Z93S-0011-R5b-SM-4RGNI 12.9
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

286.5

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 286.5
FF:10164-103B2 76 years, female 436.3
FF:10379-105H1 89 years, female 136.7

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