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GJA1
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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX
MOUSE BRAIN

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:315.6TPM
GTEx:106.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Medium
Neuropil:High
 

Antibody staining

Antibody HPA035097

 

Antibody CAB010753

 

Endothelial cells

Not detected   Low  

Glial cells

Low   Low  

Neuronal cells

Not detected   Medium  

Neuropil

Medium   High  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

315.6

N/A Male, age 5
Sample 1
TPM: 528.0
overview Female, age 40
Sample 2
TPM: 244.6
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 174.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

106.1

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 101.0
Samples: 114

Max RPKM: 301.9
Min RPKM: 11.2
Std RPKM: 55.3
Median RPKM: 87.3
GTEX-RU72-3026-SM-5SI7Y 301.9
GTEX-PWO3-0926-SM-2I5EY 250.9
GTEX-13IVO-2926-SM-5L3CZ 219.4
GTEX-11GSP-3226-SM-5986O 218.7
GTEX-131XW-3126-SM-5LZUC 209.1
GTEX-ZZPT-3026-SM-5GZXH 200.7
GTEX-12ZZW-2926-SM-5LZUP 197.6
GTEX-13JVG-3126-SM-5L3FH 195.3
GTEX-13OW7-3026-SM-5L3GY 189.9
GTEX-QMR6-1426-SM-32PLA 189.9
GTEX-12WSA-2926-SM-5EQ4D 185.8
GTEX-1128S-2726-SM-5H12C 180.9
GTEX-139T8-1026-SM-5J2MC 176.8
GTEX-13X6K-2926-SM-5Q5D5 173.0
GTEX-12WSD-3126-SM-5HL7P 166.6
GTEX-ZE7O-3126-SM-5HL5X 165.9
GTEX-11EI6-3026-SM-5GZZO 162.2
GTEX-1445S-3026-SM-5O9BR 161.4
GTEX-11EMC-3226-SM-5EGKW 160.4
GTEX-14A5I-2926-SM-5Q5CQ 153.4
GTEX-132Q8-3026-SM-5PNVG 152.8
GTEX-13OVJ-2826-SM-5L3GW 152.4
GTEX-12ZZZ-3026-SM-5BC67 151.0
GTEX-X4XX-3026-SM-3NMB2 148.5
GTEX-QVJO-1426-SM-2S1QY 142.2
GTEX-11NUK-2926-SM-5A5MD 139.3
GTEX-1192X-3126-SM-5N9BY 138.0
GTEX-QVUS-2826-SM-3GADB 137.2
GTEX-13S7M-3126-SM-5RQJQ 135.1
GTEX-11GSO-2926-SM-5HL73 134.4
GTEX-OXRN-2426-SM-2I5EQ 131.4
GTEX-ZVT3-3026-SM-5E43N 130.5
GTEX-13QIC-2926-SM-5J2NF 130.0
GTEX-NPJ8-1526-SM-2D7VU 127.5
GTEX-QDT8-2926-SM-32PKC 126.7
GTEX-XLM4-3026-SM-4AT6L 122.0
GTEX-R55F-1326-SM-5S2V4 117.9
GTEX-13PL6-3126-SM-5LUAR 114.4
GTEX-11TTK-2926-SM-5PNYP 114.2
GTEX-1399T-3026-SM-5KLZC 114.0
GTEX-144FL-3026-SM-5O99C 112.8
GTEX-13X6J-3026-SM-5Q5CU 112.7
GTEX-14ASI-3026-SM-5S2PN 112.4
GTEX-13OW6-3026-SM-5J2MI 108.8
GTEX-11DXY-3226-SM-5GIDE 108.2
GTEX-144GL-3026-SM-5Q5CW 108.0
GTEX-145MG-3026-SM-5RQJA 105.6
GTEX-145LS-3126-SM-5Q5BY 105.2
GTEX-NPJ7-2726-SM-2I3FT 101.9
GTEX-147GR-3026-SM-5S2ML 100.7
GTEX-11ONC-2926-SM-5P9JM 94.9
GTEX-11DXW-1126-SM-5H12Q 93.0
GTEX-ZAK1-3026-SM-5S2MJ 92.8
GTEX-12WSH-3026-SM-5CVNI 92.0
GTEX-WZTO-2926-SM-3NM9I 89.6
GTEX-TSE9-3026-SM-3DB76 88.6
GTEX-11OC5-0726-SM-5P9JK 88.3
GTEX-14BMV-3026-SM-5S2PQ 86.3
GTEX-13O3Q-2926-SM-5KM45 85.9
GTEX-13JUV-2926-SM-5LZX7 85.3
GTEX-13OVH-3026-SM-5MR4N 84.6
GTEX-131YS-3126-SM-5KLYT 81.0
GTEX-13PVQ-3026-SM-5SI93 80.2
GTEX-11PRG-2926-SM-5987A 80.0
GTEX-12ZZX-2926-SM-5GCOQ 79.1
GTEX-13NYS-3126-SM-5KLYV 79.1
GTEX-13OW8-2826-SM-5L3GC 78.5
GTEX-13FHO-3026-SM-5J1O9 77.9
GTEX-ZUA1-3026-SM-59HJC 77.9
GTEX-13O3O-3126-SM-5KM3H 77.3
GTEX-Y8DK-0826-SM-4TT3T 75.2
GTEX-145MF-2726-SM-5O995 73.2
GTEX-13FXS-3126-SM-5J2NN 72.3
GTEX-XOTO-3026-SM-4B65M 72.2
GTEX-1117F-3226-SM-5N9CT 70.8
GTEX-11O72-2926-SM-5BC4V 70.2
GTEX-YJ89-3026-SM-5IFJI 70.1
GTEX-111FC-3126-SM-5GZZ2 69.9
GTEX-12ZZY-3026-SM-5GCOU 69.9
GTEX-RNOR-2326-SM-2TF4I 69.1
GTEX-145MH-3026-SM-5Q5DZ 68.4
GTEX-11WQK-3026-SM-5EQL6 68.2
GTEX-Q2AG-2926-SM-2HMJ3 67.1
GTEX-11GS4-3126-SM-5A5LH 61.9
GTEX-Y111-2726-SM-4TT3N 61.8
GTEX-N7MT-1126-SM-5SI7V 60.3
GTEX-UTHO-3026-SM-3GAFB 60.3
GTEX-ZYFD-3026-SM-5E44C 60.1
GTEX-13NYB-3026-SM-5IJD7 57.0
GTEX-WHSE-3026-SM-3P5ZH 56.4
GTEX-13NYC-2826-SM-5K7WR 56.2
GTEX-12126-1026-SM-5P9JJ 55.0
GTEX-YFC4-3126-SM-5PNV6 54.6
GTEX-11NV4-2126-SM-5N9DS 54.1
GTEX-13FHP-3026-SM-5IJBS 53.2
GTEX-12WSC-3026-SM-5GCNF 52.1
GTEX-13FLW-1426-SM-5K7YE 50.5
GTEX-WWYW-3126-SM-3NB39 49.8
GTEX-X585-3026-SM-46MWF 42.3
GTEX-T5JC-2426-SM-3NMDB 41.0
GTEX-13G51-3026-SM-5IJB8 40.7
GTEX-13VXU-2926-SM-5LU5C 37.6
GTEX-T6MN-2626-SM-32PMQ 34.8
GTEX-WVLH-3026-SM-3MJG9 33.2
GTEX-T2IS-3026-SM-32QPM 31.2
GTEX-117XS-3026-SM-5N9CA 30.9
GTEX-11ZUS-2926-SM-5FQSL 30.1
GTEX-1313W-3126-SM-5LZUI 29.6
GTEX-13SLX-3126-SM-5S2Q5 29.0
GTEX-PVOW-2526-SM-2XCF7 24.8
GTEX-ZAJG-3126-SM-5HL9J 22.6
GTEX-11OF3-2926-SM-5HL78 14.6
GTEX-Z93S-2926-SM-57WB9 14.6
GTEX-WL46-2926-SM-3LK82 11.2
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 111.6
Samples: 108

Max RPKM: 377.6
Min RPKM: 4.4
Std RPKM: 76.4
Median RPKM: 98.3
GTEX-1445S-0011-R10a-SM-5PNWB 377.6
GTEX-13SLW-0011-R10a-SM-5S2UI 344.8
GTEX-13JUV-0011-R10b-SM-5LZXR 267.5
GTEX-1477Z-0011-R10b-SM-5S2RF 261.3
GTEX-14753-0011-R10b-SM-5S2WE 255.0
GTEX-12WSA-0011-R10b-SM-5P9ET 248.2
GTEX-12WSD-0011-R10b-SM-5GU79 246.7
GTEX-12ZZW-0011-R10b-SM-5HL9X 243.3
GTEX-ZV68-0011-R10a-SM-51MT7 233.0
GTEX-QMR6-0011-R10A-SM-32PKO 231.9
GTEX-11WQC-0011-R10a-SM-57WCT 219.3
GTEX-13OVJ-0011-R10b-SM-5L3HT 218.6
GTEX-139TS-0011-R10a-SM-5K7TU 217.5
GTEX-11H98-0011-R10b-SM-5NQ98 213.8
GTEX-11GSP-0011-R10a-SM-5NQ7J 213.1
GTEX-NPJ8-0011-R10A-SM-2YUMO 201.9
GTEX-ZAB4-0011-R10a-SM-4SOKH 188.8
GTEX-132Q8-0011-R10b-SM-5DUWZ 186.5
GTEX-13X6I-0011-R10a-SM-5PNWI 185.4
GTEX-145LU-0011-R10a-SM-5PNWJ 182.1
GTEX-13JVG-0011-R10b-SM-5KM2P 178.7
GTEX-OXRN-0011-R10A-SM-2I5GC 170.9
GTEX-13FLV-0011-R10b-SM-5LZZ2 170.2
GTEX-14BIL-0011-R10a-SM-5SI75 168.0
GTEX-ZF28-0011-R10a-SM-4WWEH 167.3
GTEX-13OW8-0011-R10a-SM-5L3H6 163.4
GTEX-131XW-0011-R10a-SM-5DUVA 161.3
GTEX-QDT8-0011-R10A-SM-32PKG 159.8
GTEX-P44H-0011-R10A-SM-2XCEK 158.0
GTEX-XLM4-0011-R10A-SM-4AT5P 156.4
GTEX-OXRO-0011-R10A-SM-2I5EH 152.4
GTEX-147F4-0011-R10b-SM-5S2WC 149.0
GTEX-13X6K-0011-R10a-SM-5P9JR 148.1
GTEX-NPJ7-0011-R10A-SM-2I3E5 143.0
GTEX-13FHO-0011-R10b-SM-5J2MM 142.0
GTEX-QVUS-0011-R10A-SM-3GIK3 138.2
GTEX-12WSM-0011-R10a-SM-5DUWV 131.8
GTEX-ZUA1-0011-R10a-SM-51MT6 129.4
GTEX-ZXG5-0011-R10a-SM-57WDD 129.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 121.6
GTEX-XMD1-0011-R10A-SM-4AT4A 118.6
GTEX-12ZZY-0011-R10b-SM-5HL7W 118.1
GTEX-13OW6-0011-R10a-SM-5L3HE 116.7
GTEX-NL4W-0011-R10A-SM-2I3DY 114.6
GTEX-13S7M-0011-R10b-SM-5PNZB 114.4
GTEX-RVPU-0011-R10A-SM-2XCAH 111.5
GTEX-13FXS-0011-R10a-SM-5J2MA 111.2
GTEX-13OVL-0011-R10a-SM-5L3GS 108.0
GTEX-TSE9-0011-R10A-SM-3DB7O 103.6
GTEX-X4XX-0011-R10B-SM-46MWO 102.5
GTEX-147GR-0011-R10b-SM-5S2UM 102.2
GTEX-12126-0011-R10b-SM-5BC6T 100.1
GTEX-145MG-0011-R10a-SM-5PNWG 99.0
GTEX-ZDXO-0011-R10a-SM-4WWD8 98.9
GTEX-ZVT3-0011-R10b-SM-57WB6 97.8
GTEX-14ASI-0011-R10b-SM-5S2VZ 97.7
GTEX-13CZV-0011-R10b-SM-5LZYD 93.5
GTEX-13N2G-0011-R10a-SM-5MR34 93.1
GTEX-131XH-0011-R10a-SM-5EGLJ 91.1
GTEX-13IVO-0011-R10a-SM-5LZY3 89.0
GTEX-ZVZQ-0011-R10b-SM-51MRT 85.7
GTEX-QVJO-0011-R10A-SM-2S1QJ 81.7
GTEX-X261-0011-R10B-SM-4E3JT 78.3
GTEX-N7MT-0011-R10A-SM-2I3E1 77.8
GTEX-13NYS-0011-R10a-SM-5MR4S 77.0
GTEX-12WSH-0011-R10a-SM-5LZUS 75.8
GTEX-13QIC-0011-R10a-SM-5O9C7 74.7
GTEX-13QJC-0011-R10a-SM-5SI63 71.9
GTEX-X4EP-0011-R10B-SM-4QASJ 67.9
GTEX-13G51-0011-R10b-SM-5LZYF 65.8
GTEX-YJ89-0011-R10a-SM-4SOK9 64.7
GTEX-Q2AG-0011-R10A-SM-2HMLA 64.4
GTEX-11WQK-0011-R10a-SM-5BC6R 64.3
GTEX-13RTJ-0011-R10b-SM-5O9CW 62.3
GTEX-145LS-0011-R10a-SM-5PNUQ 61.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 53.8
GTEX-WWYW-0011-R10A-SM-3NB35 53.6
GTEX-13O3Q-0011-R10b-SM-5KM39 50.1
GTEX-YFC4-0011-R10a-SM-4SOK5 48.7
GTEX-S7SE-0011-R10A-SM-2XCDF 48.6
GTEX-13O3O-0011-R10a-SM-5LUA9 48.5
GTEX-T5JC-0011-R10A-SM-32PM2 47.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 46.3
GTEX-13NYB-0011-R10a-SM-5KM43 46.1
GTEX-13NZA-0011-R10b-SM-5KM54 43.8
GTEX-13X6J-0011-R10b-SM-5PNWA 43.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 42.8
GTEX-13OW7-0011-R10a-SM-5L3H3 42.1
GTEX-12WSF-0011-R10a-SM-5LZVH 41.2
GTEX-Y8DK-0011-R10A-SM-4SOK1 39.8
GTEX-131YS-0011-R10b-SM-5EQ5N 38.1
GTEX-14BIN-0011-R10a-SM-5S2UA 37.7
GTEX-WZTO-0011-R10B-SM-4E3KB 35.9
GTEX-13N1W-0011-R10b-SM-5MR4H 34.7
GTEX-Z93S-0011-R10a-SM-4RGNM 33.9
GTEX-11ZUS-0011-R10b-SM-5BC79 32.8
GTEX-145MH-0011-R10b-SM-5PNUK 28.4
GTEX-13FLW-0011-R10b-SM-5LZZF 28.0
GTEX-WVLH-0011-R10A-SM-3MJFM 24.1
GTEX-N7MS-0011-R10A-SM-2HMJK 21.1
GTEX-NL3H-0011-R10A-SM-2I3E9 17.9
GTEX-T6MN-0011-R10A-SM-32QP7 17.5
GTEX-13SLX-0011-R10a-SM-5P9HV 16.8
GTEX-12WSE-0011-R10b-SM-5P9JV 14.9
GTEX-X585-0011-R10A-SM-46MUY 14.6
GTEX-12WSC-0011-R10a-SM-5GU57 11.3
GTEX-1313W-0011-R10b-SM-5DUXA 10.4
GTEX-WL46-0011-R10A-SM-3MJFQ 4.4
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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