We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
ABCA5
  • TISSUE

  • CELL

  • CANCER

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:11.0TPM
GTEx:9.3RPKM
FANTOM5:48.6Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:Low
 

Antibody staining

Antibody HPA022032

 

Bile duct cells

Medium  

Hepatocytes

Medium  
 
 
 

LIVER - HPA RNA-seq

Average TPM

11.0

N/A Female, age 60
Sample 1
TPM: 9.9
overview Male, age 54
Sample 2
TPM: 14.4
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74
Sample 3
TPM: 10.0
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62
Sample 4
TPM: 16.4
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78
Sample 5
TPM: 8.8
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53
Sample 6
TPM: 6.6
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77
Sample 7
TPM: 12.7
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72
Sample 8
TPM: 5.0
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70
Sample 9
TPM: 12.1
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23
Sample 10
TPM: 13.6
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

9.3

GTEx sample id

RPKM

 

Liver

Liver
RPKM: 9.3
Samples: 119

Max RPKM: 17.1
Min RPKM: 4
Std RPKM: 2.7
Median RPKM: 8.5
GTEX-11OF3-0726-SM-5BC4Z 17.1
GTEX-QEG4-1826-SM-4R1JN 15.8
GTEX-WZTO-0626-SM-4PQYY 15.4
GTEX-X4XY-1626-SM-46MVN 15.2
GTEX-14C38-1526-SM-5RQJ7 14.5
GTEX-ZAB4-0826-SM-5LU9D 14.5
GTEX-T6MN-1226-SM-3NMA5 14.4
GTEX-13NZB-0626-SM-5IFH6 13.9
GTEX-RN64-1826-SM-48FDV 13.8
GTEX-11NUK-1226-SM-5P9GM 13.7
GTEX-X261-1726-SM-4PQYT 13.7
GTEX-1399T-0826-SM-5IFES 13.3
GTEX-ZVT3-1626-SM-5GU66 13.2
GTEX-13OW6-2626-SM-5IFF2 13.1
GTEX-X4EP-1026-SM-4QAS5 13.0
GTEX-Y5V5-0926-SM-4VBPZ 13.0
GTEX-11NV4-1326-SM-5HL6V 12.8
GTEX-13113-1326-SM-5GCOI 12.8
GTEX-13N2G-0926-SM-5IFGJ 12.7
GTEX-131YS-1626-SM-5HL6C 12.3
GTEX-14A5I-1726-SM-5QGQ5 12.1
GTEX-ZZPU-0426-SM-5GZYH 12.1
GTEX-RNOR-1426-SM-48FDJ 12.0
GTEX-13NYB-1026-SM-5IFH3 11.9
GTEX-145LU-1326-SM-5LU9N 11.9
GTEX-14AS3-0126-SM-5Q5F4 11.7
GTEX-11DXY-0526-SM-5EGGQ 11.6
GTEX-13VXU-0926-SM-5IFFH 11.4
GTEX-S4Z8-0526-SM-4AD4T 11.4
GTEX-XBEC-1526-SM-4AT68 11.4
GTEX-S33H-1626-SM-4AD68 11.3
GTEX-U3ZN-0226-SM-3DB8D 11.0
GTEX-YECK-1926-SM-4W21H 10.6
GTEX-11WQC-0726-SM-5EQMR 10.5
GTEX-UTHO-2426-SM-4JBHD 10.5
GTEX-YEC4-0826-SM-5P9FV 10.4
GTEX-11GSP-0626-SM-5986T 10.3
GTEX-147F4-1426-SM-5LUA8 10.3
GTEX-UPIC-0926-SM-4IHLV 10.3
GTEX-ZVT4-0626-SM-5E45T 10.3
GTEX-11ZTS-1426-SM-5EQMM 10.2
GTEX-13FTZ-0726-SM-5IFFY 10.2
GTEX-12WSL-0226-SM-5CVMJ 9.9
GTEX-12WSI-0226-SM-5GCNA 9.8
GTEX-P78B-1326-SM-3P611 9.8
GTEX-ZYY3-0626-SM-5NQ6W 9.7
GTEX-132NY-0926-SM-5P9G3 9.6
GTEX-RTLS-1326-SM-46MUN 9.6
GTEX-11ZVC-0726-SM-5FQT9 9.4
GTEX-131XE-0326-SM-5LZVO 9.3
GTEX-YFC4-1526-SM-5IFJS 9.3
GTEX-145MF-0826-SM-5QGQA 9.2
GTEX-REY6-1226-SM-48FDR 9.2
GTEX-13112-1426-SM-5EGH8 9.1
GTEX-1212Z-0226-SM-59HLF 8.9
GTEX-13N11-0926-SM-5IJG2 8.8
GTEX-1497J-0726-SM-5Q5D1 8.8
GTEX-Z9EW-0426-SM-5CVM9 8.7
GTEX-RU72-1426-SM-46MUF 8.6
GTEX-13NZ9-1326-SM-5MR3V 8.5
GTEX-WFON-1726-SM-4LVMQ 8.5
GTEX-12WSM-0726-SM-5GCOW 8.4
GTEX-13FTW-1126-SM-5J2NV 8.4
GTEX-146FH-1526-SM-5NQBU 8.4
GTEX-R53T-0326-SM-48FEC 8.4
GTEX-SJXC-1226-SM-4DM78 8.4
GTEX-VUSG-0126-SM-4KL1X 8.3
GTEX-QDVN-0826-SM-48TZ2 8.2
GTEX-1269C-0626-SM-5FQSS 8.1
GTEX-144GM-1326-SM-5LU5E 8.1
GTEX-S32W-1926-SM-4AD63 8.1
GTEX-UPK5-1426-SM-4JBHH 8.1
GTEX-139TU-0826-SM-5IJFG 8.0
GTEX-XOTO-0826-SM-4B65O 8.0
GTEX-ZVP2-0626-SM-51MSO 8.0
GTEX-12696-0826-SM-5EGGE 7.9
GTEX-12KS4-1326-SM-5LUB3 7.9
GTEX-12WSD-1426-SM-5GCN9 7.9
GTEX-X3Y1-2726-SM-4PQZH 7.9
GTEX-QEL4-1226-SM-447A4 7.8
GTEX-OOBJ-0826-SM-3NB2K 7.7
GTEX-TKQ2-1726-SM-4DXUP 7.7
GTEX-11ZUS-2526-SM-59872 7.5
GTEX-12WSG-0626-SM-5FQTQ 7.5
GTEX-12ZZZ-1326-SM-59HKW 7.5
GTEX-WQUQ-1926-SM-4OOSA 7.5
GTEX-Q2AG-1126-SM-48U1P 7.4
GTEX-147JS-1126-SM-5RQIW 7.3
GTEX-131XH-0626-SM-5LZWH 7.2
GTEX-13PVR-0126-SM-5S2PY 7.2
GTEX-QV44-0326-SM-4R1KD 7.2
GTEX-X4EO-1126-SM-4QARQ 7.2
GTEX-11EQ9-0526-SM-5A5JZ 7.1
GTEX-ZTPG-1426-SM-51MT3 7.1
GTEX-14E1K-0326-SM-5S2PE 7.0
GTEX-14DAQ-1726-SM-5S2R2 6.9
GTEX-ZYT6-0626-SM-5E45V 6.9
GTEX-13FLV-0326-SM-5N9DJ 6.6
GTEX-11DXZ-0126-SM-5EGGY 6.5
GTEX-139YR-0226-SM-5IFEM 6.5
GTEX-145MO-2326-SM-5NQ9K 6.5
GTEX-RM2N-1926-SM-48FCU 6.5
GTEX-ZAB5-0426-SM-5CVMI 6.5
GTEX-Q734-0326-SM-48U15 6.4
GTEX-ZPU1-0826-SM-57WG2 6.4
GTEX-13O3O-1826-SM-5IFGW 5.9
GTEX-13QJC-0726-SM-5RQJK 5.8
GTEX-QESD-2026-SM-447BI 5.8
GTEX-RWSA-1426-SM-47JXA 5.8
GTEX-Y5LM-0426-SM-4VBRO 5.8
GTEX-PX3G-0826-SM-48TZS 5.6
GTEX-1399R-1226-SM-5P9GF 5.5
GTEX-WYVS-1926-SM-4PQZ2 5.5
GTEX-139TS-1426-SM-5IFJD 5.4
GTEX-ZF29-2026-SM-4WWB7 5.4
GTEX-13SLX-1226-SM-5S2Q6 5.3
GTEX-ZF2S-3026-SM-4WWCH 5.3
GTEX-14753-1626-SM-5NQ9L 4.6
GTEX-YB5E-0326-SM-5IFHU 4.0
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

48.6

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 48.6
FF:10018-101C9 64,69,70 years, mixed 48.6

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.