Expression of CNTNAP3B in cancer - Summary

CANCER ATLAS

Gene description

Contactin associated protein-like 3B

Protein class

Predicted intracellular proteins, Predicted membrane proteins, Predicted secreted proteins

Protein evidence

Evidence at transcript level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA015604	HPA047731

GENE INFORMATION
Gene name	CNTNAP3B
Synonyms
Description	Contactin associated protein-like 3B (HGNC Symbol)
Entrez gene summary
Chromosome	9
Cytoband	p11.2
Chromosome location (bp)	41890314 - 42129510
Protein evidence	Evidence at transcript level (all genes)
Ensembl	ENSG00000154529 (version 83.38)
Entrez gene	728577
UniProt	Q96NU0 (UniProt - Evidence at transcript level)
neXtProt	NX_Q96NU0
Antibodypedia	CNTNAP3B antibodies

PROTEIN BROWSER

CNTNAP3B-001	CNTNAP3B-003	CNTNAP3B-004	CNTNAP3B-008	CNTNAP3B-009	CNTNAP3B-013	CNTNAP3B-014

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
CNTNAP3B-001 ENSP00000478671 ENST00000377561	A0A087WUH3 [Direct mapping] Contactin-associated protein-like 3B Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	1288 aa 140.4 kDa	Yes	1
CNTNAP3B-003 ENSP00000276974 ENST00000276974	Q96NU0 [Direct mapping] Contactin-associated protein-like 3B Show all	MEMSAT3 predicted membrane proteins Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0007155 [cell adhesion] GO:0016021 [integral component of membrane] Show all	380 aa 42.4 kDa	Yes	0
CNTNAP3B-004 ENSP00000483642 ENST00000476961	A0A087X0T4 [Direct mapping] Contactin-associated protein-like 3B Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	180 aa 20.2 kDa	No	1
CNTNAP3B-008 ENSP00000484919 ENST00000489789	A0A087X2E4 [Direct mapping] Contactin-associated protein-like 3B Show all	SCAMPI predicted membrane proteins Predicted intracellular proteins Show all		167 aa 18.7 kDa	No	0
CNTNAP3B-009 ENSP00000481131 ENST00000341990	A0A087WXL9 [Direct mapping] Contactin-associated protein-like 3B Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all	GO:0005515 [protein binding] Show all	745 aa 81.3 kDa	Yes	0
CNTNAP3B-013 ENSP00000483830 ENST00000612828	A0A087X119 [Direct mapping] Contactin-associated protein-like 3B Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0005515 [protein binding] GO:0016021 [integral component of membrane] Show all	1207 aa 131.9 kDa	Yes	1
CNTNAP3B-014 ENSP00000478659 ENST00000617422	A0A087WUG9 [Direct mapping] Contactin-associated protein-like 3B Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Show all		652 aa 71.6 kDa	Yes	0