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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:10.1RPKM
FANTOM5:28.1Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:High
 

Antibody staining

Antibody HPA035735

 

Antibody HPA035736

 

Antibody CAB015382

 

Antibody CAB075728

 

Antibody CAB075729

 

Glial cells

Not detected   Not detected   Not detected   Not detected   Not detected  

Neuronal cells

High   Medium   High   High   High  
         
         
         

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

10.1

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 10.1
Samples: 117

Max RPKM: 22.6
Min RPKM: 3.7
Std RPKM: 2.7
Median RPKM: 10
GTEX-T2IS-0011-R5A-SM-32QP4 22.6
GTEX-P44H-0011-R5A-SM-2XCEX 18.7
GTEX-12WSA-0011-R5b-SM-5GU5I 17.1
GTEX-T6MN-0011-R5A-SM-32QPD 15.9
GTEX-WWYW-0011-R5A-SM-3NB3E 14.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 14.4
GTEX-12WSF-0011-R5a-SM-5HL8K 14.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 13.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 13.2
GTEX-S7SE-0011-R5A-SM-2XCDA 13.1
GTEX-1399T-0011-R5b-SM-5IJDK 13.0
GTEX-OHPN-0011-R5A-SM-2I5FF 12.9
GTEX-12WSB-0011-R5b-SM-5GU67 12.6
GTEX-13JUV-0011-R5a-SM-5LZY5 12.6
GTEX-PVOW-0011-R5A-SM-32PL7 12.6
GTEX-QVJO-0011-R5A-SM-2S1QM 12.5
GTEX-TSE9-0011-R5A-SM-3DB7J 12.4
GTEX-11H98-0011-R5b-SM-57WCF 12.3
GTEX-WVLH-0011-R5A-SM-3MJFW 12.3
GTEX-X585-0011-R5A-SM-46MVI 12.2
GTEX-139TT-0011-R5b-SM-5K7W8 12.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 12.1
GTEX-NL4W-0011-R5a-SM-2I3GD 12.1
GTEX-13X6K-0011-R5b-SM-5PNUE 11.9
GTEX-QMR6-0011-R5A-SM-32PKT 11.9
GTEX-131YS-0011-R5b-SM-5K7YB 11.8
GTEX-13NYS-0011-R5a-SM-5MR4D 11.8
GTEX-13O3O-0011-R5b-SM-5KM44 11.7
GTEX-N7MT-0011-R5a-SM-2I3G6 11.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 11.5
GTEX-UTHO-0011-R5A-SM-3GIJD 11.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 11.5
GTEX-ZUA1-0011-R5b-SM-51MTG 11.5
GTEX-13G51-0011-R5a-SM-5L3EB 11.3
GTEX-N7MS-0011-R5a-SM-2HMK8 11.1
GTEX-RVPU-0011-R5A-SM-2XCAD 11.0
GTEX-RVPV-0011-R5A-SM-2TF69 11.0
GTEX-11OF3-0011-R5a-SM-57WB4 10.9
GTEX-13CZV-0011-R5a-SM-5K7XA 10.9
GTEX-X261-0011-R5A-SM-3NMB4 10.9
GTEX-132Q8-0011-R5a-SM-5IJDM 10.7
GTEX-NPJ7-0011-R5a-SM-33HBK 10.7
GTEX-WZTO-0011-R5B-SM-3NMC5 10.6
GTEX-13X6I-0011-R5a-SM-5PNWW 10.5
GTEX-1313W-0011-R5b-SM-5L3EP 10.4
GTEX-13FLV-0011-R5a-SM-5LZWT 10.4
GTEX-WL46-0011-R5A-SM-3LK6V 10.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 10.3
GTEX-13OW5-0011-R5b-SM-5L3FR 10.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 10.3
GTEX-11GSP-0011-R5a-SM-57WBE 10.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 10.2
GTEX-12WSC-0011-R5b-SM-5CVNS 10.1
GTEX-12WSD-0011-R5b-SM-5CVNG 10.1
GTEX-145MH-0011-R5a-SM-5P9JT 10.1
GTEX-14BIM-0011-R5b-SM-5S2RM 10.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 10.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 10.0
GTEX-X4XX-0011-R5A-SM-46MWN 10.0
GTEX-13OW6-0011-R5a-SM-5O9BK 9.9
GTEX-144GO-0011-R5a-SM-5PNUR 9.9
GTEX-R55E-0011-R5A-SM-2TC5N 9.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 9.9
GTEX-11NV4-0011-R5a-SM-5NQ88 9.8
GTEX-13VXU-0011-R5a-SM-5O9D7 9.8
GTEX-13OVL-0011-R5b-SM-5L3FU 9.7
GTEX-145LS-0011-R5a-SM-5SI65 9.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 9.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 9.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 9.4
GTEX-13SLX-0011-R5a-SM-5O9BV 9.2
GTEX-RU72-0011-R5A-SM-2TF6U 9.2
GTEX-YFC4-0011-R5a-SM-4RGLR 9.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 9.2
GTEX-13NYB-0011-R5a-SM-5MR45 9.1
GTEX-13JVG-0011-R5a-SM-5MR4O 9.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 9.0
GTEX-Z93S-0011-R5b-SM-4RGNI 9.0
GTEX-13FLW-0011-R5a-SM-5LZX6 8.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 8.9
GTEX-13X6J-0011-R5b-SM-5PNWT 8.9
GTEX-14ABY-0011-R5b-SM-5SI7B 8.8
GTEX-XMD1-0011-R5A-SM-4AT47 8.8
GTEX-13OW7-0011-R5b-SM-5O9DM 8.7
GTEX-NL3H-0011-R5a-SM-2I3GB 8.7
GTEX-ZE7O-0011-R5a-SM-57WBO 8.7
GTEX-ZXG5-0011-R5b-SM-57WBN 8.7
GTEX-139TS-0011-R5b-SM-5J2MZ 8.6
GTEX-XOTO-0011-R5A-SM-4B657 8.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 8.5
GTEX-11WQC-0011-R5a-SM-5BC74 8.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 8.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 8.1
GTEX-13FXS-0011-R5b-SM-5LZYE 8.0
GTEX-14BIN-0011-R5b-SM-5SI78 7.8
GTEX-139T8-0011-R5b-SM-5J1MO 7.6
GTEX-13OVH-0011-R5b-SM-5KM4L 7.6
GTEX-144GL-0011-R5b-SM-5PNUJ 7.6
GTEX-T5JC-0011-R5A-SM-32PLK 7.6
GTEX-12ZZX-0011-R5a-SM-5HL89 7.5
GTEX-13CIG-0011-R5b-SM-5L3F2 7.5
GTEX-13S7M-0011-R5b-SM-5P9HS 7.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 7.4
GTEX-1445S-0011-R5a-SM-5PNUS 7.3
GTEX-ZV68-0011-R5a-SM-4YCDW 7.3
GTEX-ZVT3-0011-R5a-SM-51MSI 7.1
GTEX-OXRN-0011-R5A-SM-2I5EF 6.8
GTEX-12WSH-0011-R5b-SM-5P9F3 6.7
GTEX-13112-0011-R5b-SM-5DUV8 6.2
GTEX-YJ89-0011-R5a-SM-4V6GM 6.1
GTEX-S7PM-0011-R5A-SM-3NM8G 6.0
GTEX-13FHP-0011-R5b-SM-5LZY2 5.6
GTEX-11UD1-0011-R5b-SM-5P9FP 5.5
GTEX-1477Z-0011-R5b-SM-5PNUO 5.4
GTEX-13CF2-0011-R5a-SM-5LZWS 5.3
GTEX-145MG-0011-R5b-SM-5S2VU 4.0
GTEX-13NZA-0011-R5b-SM-5KM4K 3.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

28.1

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 28.1
FF:10164-103B2 76 years, female 33.2
FF:10379-105H1 89 years, female 22.9

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