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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:37.9TPM
GTEx:9.1RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glial cells:Not detected
Neuronal cells:High
Neuropil:Not detected
 

Antibody staining

Antibody HPA035735

 

Antibody HPA035736

 

Antibody CAB015382

 

Antibody CAB075728

 

Antibody CAB075729

 

Endothelial cells

Not detected   Not detected   Not detected   Not detected   Not detected  

Glial cells

Not detected   Low   Not detected   Not detected   Not detected  

Neuronal cells

Low   Not detected   High   High   High  

Neuropil

Not detected   Not detected   Not detected   Not detected   Not detected  
         
         
         

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

37.9

N/A Male, age 5
Sample 1
TPM: 24.4
overview Female, age 40
Sample 2
TPM: 50.1
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 39.0
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

9.1

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 8.5
Samples: 114

Max RPKM: 15.7
Min RPKM: 5.4
Std RPKM: 1.6
Median RPKM: 8.2
GTEX-11OC5-0726-SM-5P9JK 15.7
GTEX-144FL-3026-SM-5O99C 15.2
GTEX-13OVJ-2826-SM-5L3GW 12.3
GTEX-QDT8-2926-SM-32PKC 11.9
GTEX-11WQK-3026-SM-5EQL6 11.5
GTEX-13NYC-2826-SM-5K7WR 11.3
GTEX-13FHO-3026-SM-5J1O9 11.2
GTEX-T2IS-3026-SM-32QPM 11.2
GTEX-11NUK-2926-SM-5A5MD 10.8
GTEX-13NYS-3126-SM-5KLYV 10.7
GTEX-13O3O-3126-SM-5KM3H 10.6
GTEX-14A5I-2926-SM-5Q5CQ 10.3
GTEX-PVOW-2526-SM-2XCF7 10.3
GTEX-QVUS-2826-SM-3GADB 10.3
GTEX-X585-3026-SM-46MWF 10.3
GTEX-11TTK-2926-SM-5PNYP 10.2
GTEX-WZTO-2926-SM-3NM9I 10.2
GTEX-12ZZZ-3026-SM-5BC67 10.1
GTEX-14BMV-3026-SM-5S2PQ 10.0
GTEX-TSE9-3026-SM-3DB76 9.8
GTEX-ZAK1-3026-SM-5S2MJ 9.8
GTEX-R55F-1326-SM-5S2V4 9.7
GTEX-XLM4-3026-SM-4AT6L 9.7
GTEX-ZUA1-3026-SM-59HJC 9.6
GTEX-NPJ7-2726-SM-2I3FT 9.4
GTEX-13NYB-3026-SM-5IJD7 9.3
GTEX-14ASI-3026-SM-5S2PN 9.3
GTEX-UTHO-3026-SM-3GAFB 9.3
GTEX-WVLH-3026-SM-3MJG9 9.3
GTEX-11DXY-3226-SM-5GIDE 9.2
GTEX-13G51-3026-SM-5IJB8 9.2
GTEX-13PVQ-3026-SM-5SI93 9.2
GTEX-QMR6-1426-SM-32PLA 9.2
GTEX-131YS-3126-SM-5KLYT 9.1
GTEX-145MH-3026-SM-5Q5DZ 9.1
GTEX-QVJO-1426-SM-2S1QY 9.1
GTEX-ZZPT-3026-SM-5GZXH 9.1
GTEX-11O72-2926-SM-5BC4V 9.0
GTEX-1399T-3026-SM-5KLZC 8.8
GTEX-13OW6-3026-SM-5J2MI 8.8
GTEX-X4XX-3026-SM-3NMB2 8.8
GTEX-ZVT3-3026-SM-5E43N 8.8
GTEX-111FC-3126-SM-5GZZ2 8.7
GTEX-WWYW-3126-SM-3NB39 8.7
GTEX-12ZZY-3026-SM-5GCOU 8.6
GTEX-132Q8-3026-SM-5PNVG 8.6
GTEX-13X6K-2926-SM-5Q5D5 8.6
GTEX-RNOR-2326-SM-2TF4I 8.6
GTEX-12WSH-3026-SM-5CVNI 8.5
GTEX-13FXS-3126-SM-5J2NN 8.5
GTEX-13PL6-3126-SM-5LUAR 8.5
GTEX-NPJ8-1526-SM-2D7VU 8.4
GTEX-WHSE-3026-SM-3P5ZH 8.4
GTEX-1128S-2726-SM-5H12C 8.3
GTEX-ZE7O-3126-SM-5HL5X 8.3
GTEX-11PRG-2926-SM-5987A 8.2
GTEX-145MG-3026-SM-5RQJA 8.2
GTEX-1192X-3126-SM-5N9BY 8.1
GTEX-11GSO-2926-SM-5HL73 8.1
GTEX-13JVG-3126-SM-5L3FH 8.1
GTEX-T6MN-2626-SM-32PMQ 8.1
GTEX-Y8DK-0826-SM-4TT3T 8.1
GTEX-11OF3-2926-SM-5HL78 8.0
GTEX-145LS-3126-SM-5Q5BY 8.0
GTEX-YFC4-3126-SM-5PNV6 8.0
GTEX-12WSD-3126-SM-5HL7P 7.9
GTEX-13QIC-2926-SM-5J2NF 7.9
GTEX-144GL-3026-SM-5Q5CW 7.8
GTEX-N7MT-1126-SM-5SI7V 7.8
GTEX-WL46-2926-SM-3LK82 7.8
GTEX-12ZZW-2926-SM-5LZUP 7.7
GTEX-13OVH-3026-SM-5MR4N 7.7
GTEX-ZYFD-3026-SM-5E44C 7.7
GTEX-11DXW-1126-SM-5H12Q 7.6
GTEX-12ZZX-2926-SM-5GCOQ 7.6
GTEX-13IVO-2926-SM-5L3CZ 7.6
GTEX-13OW8-2826-SM-5L3GC 7.6
GTEX-PWO3-0926-SM-2I5EY 7.6
GTEX-11EI6-3026-SM-5GZZO 7.5
GTEX-13O3Q-2926-SM-5KM45 7.5
GTEX-13OW7-3026-SM-5L3GY 7.5
GTEX-XOTO-3026-SM-4B65M 7.5
GTEX-1117F-3226-SM-5N9CT 7.4
GTEX-12WSA-2926-SM-5EQ4D 7.4
GTEX-139T8-1026-SM-5J2MC 7.4
GTEX-13SLX-3126-SM-5S2Q5 7.4
GTEX-1445S-3026-SM-5O9BR 7.4
GTEX-RU72-3026-SM-5SI7Y 7.4
GTEX-YJ89-3026-SM-5IFJI 7.4
GTEX-117XS-3026-SM-5N9CA 7.3
GTEX-11GSP-3226-SM-5986O 7.3
GTEX-1313W-3126-SM-5LZUI 7.3
GTEX-13JUV-2926-SM-5LZX7 7.3
GTEX-13FHP-3026-SM-5IJBS 7.2
GTEX-13FLW-1426-SM-5K7YE 7.2
GTEX-145MF-2726-SM-5O995 7.2
GTEX-OXRN-2426-SM-2I5EQ 7.2
GTEX-ZAJG-3126-SM-5HL9J 7.2
GTEX-12126-1026-SM-5P9JJ 7.1
GTEX-11EMC-3226-SM-5EGKW 7.0
GTEX-11ONC-2926-SM-5P9JM 7.0
GTEX-131XW-3126-SM-5LZUC 7.0
GTEX-13S7M-3126-SM-5RQJQ 6.9
GTEX-13VXU-2926-SM-5LU5C 6.9
GTEX-13X6J-3026-SM-5Q5CU 6.9
GTEX-11ZUS-2926-SM-5FQSL 6.8
GTEX-Q2AG-2926-SM-2HMJ3 6.8
GTEX-Y111-2726-SM-4TT3N 6.8
GTEX-12WSC-3026-SM-5GCNF 6.7
GTEX-147GR-3026-SM-5S2ML 6.6
GTEX-T5JC-2426-SM-3NMDB 6.6
GTEX-11GS4-3126-SM-5A5LH 6.3
GTEX-Z93S-2926-SM-57WB9 5.9
GTEX-11NV4-2126-SM-5N9DS 5.4
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 9.6
Samples: 108

Max RPKM: 28.1
Min RPKM: 5
Std RPKM: 2.7
Median RPKM: 9.1
GTEX-13N2G-0011-R10a-SM-5MR34 28.1
GTEX-X4EP-0011-R10B-SM-4QASJ 18.0
GTEX-QVUS-0011-R10A-SM-3GIK3 16.6
GTEX-13QJC-0011-R10a-SM-5SI63 15.9
GTEX-12WSD-0011-R10b-SM-5GU79 14.5
GTEX-12ZZY-0011-R10b-SM-5HL7W 14.0
GTEX-P44H-0011-R10A-SM-2XCEK 13.6
GTEX-NPJ7-0011-R10A-SM-2I3E5 13.2
GTEX-QDT8-0011-R10A-SM-32PKG 13.1
GTEX-13OVJ-0011-R10b-SM-5L3HT 13.0
GTEX-WVLH-0011-R10A-SM-3MJFM 11.9
GTEX-T6MN-0011-R10A-SM-32QP7 11.7
GTEX-13NYS-0011-R10a-SM-5MR4S 11.5
GTEX-WWYW-0011-R10A-SM-3NB35 11.5
GTEX-11WQK-0011-R10a-SM-5BC6R 11.4
GTEX-QMR6-0011-R10A-SM-32PKO 11.4
GTEX-X261-0011-R10B-SM-4E3JT 11.2
GTEX-13O3O-0011-R10a-SM-5LUA9 11.1
GTEX-11H98-0011-R10b-SM-5NQ98 11.0
GTEX-13CZV-0011-R10b-SM-5LZYD 11.0
GTEX-NL4W-0011-R10A-SM-2I3DY 10.7
GTEX-S7SE-0011-R10A-SM-2XCDF 10.7
GTEX-139TS-0011-R10a-SM-5K7TU 10.6
GTEX-14BIL-0011-R10a-SM-5SI75 10.5
GTEX-NPJ8-0011-R10A-SM-2YUMO 10.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 10.3
GTEX-13FLW-0011-R10b-SM-5LZZF 10.2
GTEX-ZUA1-0011-R10a-SM-51MT6 10.2
GTEX-13FHO-0011-R10b-SM-5J2MM 10.1
GTEX-YJ89-0011-R10a-SM-4SOK9 10.1
GTEX-X4XX-0011-R10B-SM-46MWO 10.0
GTEX-13X6K-0011-R10a-SM-5P9JR 9.9
GTEX-1445S-0011-R10a-SM-5PNWB 9.9
GTEX-TSE9-0011-R10A-SM-3DB7O 9.9
GTEX-12WSC-0011-R10a-SM-5GU57 9.7
GTEX-13QIC-0011-R10a-SM-5O9C7 9.7
GTEX-YFC4-0011-R10a-SM-4SOK5 9.7
GTEX-12WSH-0011-R10a-SM-5LZUS 9.6
GTEX-12WSM-0011-R10a-SM-5DUWV 9.6
GTEX-147GR-0011-R10b-SM-5S2UM 9.6
GTEX-ZVT3-0011-R10b-SM-57WB6 9.6
GTEX-13N1W-0011-R10b-SM-5MR4H 9.5
GTEX-145LU-0011-R10a-SM-5PNWJ 9.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 9.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 9.4
GTEX-12WSF-0011-R10a-SM-5LZVH 9.2
GTEX-132Q8-0011-R10b-SM-5DUWZ 9.2
GTEX-13OW6-0011-R10a-SM-5L3HE 9.2
GTEX-WL46-0011-R10A-SM-3MJFQ 9.2
GTEX-X585-0011-R10A-SM-46MUY 9.2
GTEX-ZVZQ-0011-R10b-SM-51MRT 9.2
GTEX-11ZUS-0011-R10b-SM-5BC79 9.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 9.1
GTEX-13O3Q-0011-R10b-SM-5KM39 9.1
GTEX-14BIN-0011-R10a-SM-5S2UA 9.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 9.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 9.1
GTEX-13FXS-0011-R10a-SM-5J2MA 9.0
GTEX-12ZZX-0011-R10b-SM-5DUWK 8.8
GTEX-131YS-0011-R10b-SM-5EQ5N 8.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 8.8
GTEX-145MG-0011-R10a-SM-5PNWG 8.8
GTEX-XLM4-0011-R10A-SM-4AT5P 8.8
GTEX-13JUV-0011-R10b-SM-5LZXR 8.7
GTEX-N7MS-0011-R10A-SM-2HMJK 8.7
GTEX-12126-0011-R10b-SM-5BC6T 8.6
GTEX-12WSA-0011-R10b-SM-5P9ET 8.6
GTEX-1313W-0011-R10b-SM-5DUXA 8.6
GTEX-13S7M-0011-R10b-SM-5PNZB 8.6
GTEX-13X6J-0011-R10b-SM-5PNWA 8.6
GTEX-OXRO-0011-R10A-SM-2I5EH 8.6
GTEX-Q2AG-0011-R10A-SM-2HMLA 8.6
GTEX-XMD1-0011-R10A-SM-4AT4A 8.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 8.5
GTEX-13SLX-0011-R10a-SM-5P9HV 8.5
GTEX-13X6I-0011-R10a-SM-5PNWI 8.5
GTEX-145MH-0011-R10b-SM-5PNUK 8.4
GTEX-147F4-0011-R10b-SM-5S2WC 8.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 8.3
GTEX-13NYB-0011-R10a-SM-5KM43 8.3
GTEX-13OVL-0011-R10a-SM-5L3GS 8.3
GTEX-145LS-0011-R10a-SM-5PNUQ 8.3
GTEX-13SLW-0011-R10a-SM-5S2UI 8.2
GTEX-WZTO-0011-R10B-SM-4E3KB 8.2
GTEX-ZF28-0011-R10a-SM-4WWEH 8.2
GTEX-OXRN-0011-R10A-SM-2I5GC 8.1
GTEX-T5JC-0011-R10A-SM-32PM2 8.1
GTEX-12WSE-0011-R10b-SM-5P9JV 8.0
GTEX-131XH-0011-R10a-SM-5EGLJ 7.9
GTEX-13G51-0011-R10b-SM-5LZYF 7.8
GTEX-RVPU-0011-R10A-SM-2XCAH 7.8
GTEX-NL3H-0011-R10A-SM-2I3E9 7.7
GTEX-ZE7O-0011-R10a-SM-57WAZ 7.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 7.6
GTEX-13FTZ-0011-R10b-SM-5KLZS 7.5
GTEX-13OW8-0011-R10a-SM-5L3H6 7.3
GTEX-N7MT-0011-R10A-SM-2I3E1 7.3
GTEX-11WQC-0011-R10a-SM-57WCT 7.2
GTEX-13OW7-0011-R10a-SM-5L3H3 7.2
GTEX-Z93S-0011-R10a-SM-4RGNM 7.2
GTEX-ZV68-0011-R10a-SM-51MT7 7.1
GTEX-13JVG-0011-R10b-SM-5KM2P 6.9
GTEX-13NZA-0011-R10b-SM-5KM54 6.8
GTEX-131XW-0011-R10a-SM-5DUVA 6.5
GTEX-ZXG5-0011-R10a-SM-57WDD 6.4
GTEX-1477Z-0011-R10b-SM-5S2RF 6.2
GTEX-14753-0011-R10b-SM-5S2WE 6.0
GTEX-13IVO-0011-R10a-SM-5LZY3 5.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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