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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:576.3TPM
GTEx:225.4RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Not detected
Neuronal cells:Low
Neuropil:Medium
 

Antibody staining

Antibody HPA003140

 

Antibody CAB062566

 

Antibody CAB068245

 

Endothelial cells

Medium   Not detected   Low  

Glial cells

Not detected   Not detected   Not detected  

Neuronal cells

Medium   Not detected   Not detected  

Neuropil

Low   Medium   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

576.3

N/A Male, age 5
Sample 1
TPM: 935.6
overview Female, age 40
Sample 2
TPM: 343.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 449.8
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

225.4

GTEx sample id

RPKM

168.2185.7213.5103.6244.6020406080100120140160180200220240260280
 
168.2185.7213.5103.6244.6020406080100120140160180200220240260280

Brain - Cortex

Brain - Cortex
RPKM: 186.2
Samples: 114

Max RPKM: 286
Min RPKM: 73.1
Std RPKM: 35.4
Median RPKM: 185.7
GTEX-ZE7O-3126-SM-5HL5X 286.0
GTEX-13OW7-3026-SM-5L3GY 244.6
GTEX-11O72-2926-SM-5BC4V 240.3
GTEX-13X6K-2926-SM-5Q5D5 239.4
GTEX-13JVG-3126-SM-5L3FH 238.8
GTEX-11DXY-3226-SM-5GIDE 236.8
GTEX-145LS-3126-SM-5Q5BY 235.5
GTEX-131XW-3126-SM-5LZUC 233.4
GTEX-RU72-3026-SM-5SI7Y 231.4
GTEX-13O3O-3126-SM-5KM3H 231.0
GTEX-ZVT3-3026-SM-5E43N 230.7
GTEX-Y8DK-0826-SM-4TT3T 227.7
GTEX-11NUK-2926-SM-5A5MD 227.5
GTEX-TSE9-3026-SM-3DB76 226.3
GTEX-11OC5-0726-SM-5P9JK 224.3
GTEX-145MG-3026-SM-5RQJA 222.9
GTEX-12ZZZ-3026-SM-5BC67 222.3
GTEX-XLM4-3026-SM-4AT6L 222.3
GTEX-WHSE-3026-SM-3P5ZH 220.9
GTEX-13PL6-3126-SM-5LUAR 220.8
GTEX-13NYC-2826-SM-5K7WR 219.3
GTEX-11DXW-1126-SM-5H12Q 219.0
GTEX-QMR6-1426-SM-32PLA 217.2
GTEX-13OVJ-2826-SM-5L3GW 217.0
GTEX-11EI6-3026-SM-5GZZO 216.9
GTEX-14A5I-2926-SM-5Q5CQ 215.3
GTEX-ZAK1-3026-SM-5S2MJ 214.6
GTEX-11EMC-3226-SM-5EGKW 214.1
GTEX-14BMV-3026-SM-5S2PQ 213.6
GTEX-13FHO-3026-SM-5J1O9 213.3
GTEX-1399T-3026-SM-5KLZC 212.5
GTEX-14ASI-3026-SM-5S2PN 211.9
GTEX-12WSD-3126-SM-5HL7P 211.1
GTEX-QDT8-2926-SM-32PKC 210.7
GTEX-131YS-3126-SM-5KLYT 208.5
GTEX-139T8-1026-SM-5J2MC 208.5
GTEX-12ZZX-2926-SM-5GCOQ 207.8
GTEX-R55F-1326-SM-5S2V4 207.6
GTEX-11GSP-3226-SM-5986O 203.9
GTEX-13X6J-3026-SM-5Q5CU 200.0
GTEX-WZTO-2926-SM-3NM9I 199.1
GTEX-13OW6-3026-SM-5J2MI 196.8
GTEX-145MF-2726-SM-5O995 196.3
GTEX-13S7M-3126-SM-5RQJQ 195.9
GTEX-PWO3-0926-SM-2I5EY 195.6
GTEX-11TTK-2926-SM-5PNYP 193.1
GTEX-144GL-3026-SM-5Q5CW 193.0
GTEX-WWYW-3126-SM-3NB39 192.8
GTEX-13FXS-3126-SM-5J2NN 192.3
GTEX-11WQK-3026-SM-5EQL6 190.5
GTEX-T5JC-2426-SM-3NMDB 190.3
GTEX-13SLX-3126-SM-5S2Q5 190.2
GTEX-145MH-3026-SM-5Q5DZ 188.6
GTEX-1128S-2726-SM-5H12C 187.2
GTEX-WVLH-3026-SM-3MJG9 187.1
GTEX-13NYS-3126-SM-5KLYV 186.9
GTEX-RNOR-2326-SM-2TF4I 186.1
GTEX-13NYB-3026-SM-5IJD7 185.3
GTEX-X585-3026-SM-46MWF 184.8
GTEX-QVUS-2826-SM-3GADB 183.9
GTEX-13QIC-2926-SM-5J2NF 183.4
GTEX-11GSO-2926-SM-5HL73 183.0
GTEX-X4XX-3026-SM-3NMB2 182.8
GTEX-PVOW-2526-SM-2XCF7 181.9
GTEX-12ZZW-2926-SM-5LZUP 181.3
GTEX-13FLW-1426-SM-5K7YE 181.0
GTEX-11ONC-2926-SM-5P9JM 180.9
GTEX-132Q8-3026-SM-5PNVG 180.5
GTEX-1192X-3126-SM-5N9BY 180.3
GTEX-13OW8-2826-SM-5L3GC 178.7
GTEX-11PRG-2926-SM-5987A 178.2
GTEX-13OVH-3026-SM-5MR4N 178.2
GTEX-13O3Q-2926-SM-5KM45 178.1
GTEX-QVJO-1426-SM-2S1QY 178.0
GTEX-XOTO-3026-SM-4B65M 175.7
GTEX-Z93S-2926-SM-57WB9 175.2
GTEX-YFC4-3126-SM-5PNV6 171.9
GTEX-ZUA1-3026-SM-59HJC 171.0
GTEX-117XS-3026-SM-5N9CA 170.9
GTEX-YJ89-3026-SM-5IFJI 170.7
GTEX-13PVQ-3026-SM-5SI93 170.6
GTEX-UTHO-3026-SM-3GAFB 169.4
GTEX-13IVO-2926-SM-5L3CZ 169.2
GTEX-12126-1026-SM-5P9JJ 168.7
GTEX-ZYFD-3026-SM-5E44C 168.6
GTEX-12WSH-3026-SM-5CVNI 168.0
GTEX-T2IS-3026-SM-32QPM 167.8
GTEX-OXRN-2426-SM-2I5EQ 165.8
GTEX-12WSC-3026-SM-5GCNF 163.5
GTEX-ZZPT-3026-SM-5GZXH 163.2
GTEX-111FC-3126-SM-5GZZ2 162.5
GTEX-1117F-3226-SM-5N9CT 160.8
GTEX-Y111-2726-SM-4TT3N 160.1
GTEX-NPJ8-1526-SM-2D7VU 159.9
GTEX-13VXU-2926-SM-5LU5C 157.1
GTEX-T6MN-2626-SM-32PMQ 153.8
GTEX-1445S-3026-SM-5O9BR 153.4
GTEX-11ZUS-2926-SM-5FQSL 152.9
GTEX-1313W-3126-SM-5LZUI 152.4
GTEX-147GR-3026-SM-5S2ML 151.5
GTEX-WL46-2926-SM-3LK82 149.8
GTEX-13FHP-3026-SM-5IJBS 145.0
GTEX-NPJ7-2726-SM-2I3FT 144.8
GTEX-Q2AG-2926-SM-2HMJ3 140.6
GTEX-12ZZY-3026-SM-5GCOU 140.4
GTEX-144FL-3026-SM-5O99C 139.3
GTEX-13JUV-2926-SM-5LZX7 134.0
GTEX-11NV4-2126-SM-5N9DS 124.3
GTEX-11GS4-3126-SM-5A5LH 115.4
GTEX-ZAJG-3126-SM-5HL9J 109.2
GTEX-12WSA-2926-SM-5EQ4D 105.7
GTEX-11OF3-2926-SM-5HL78 103.6
GTEX-N7MT-1126-SM-5SI7V 78.5
GTEX-13G51-3026-SM-5IJB8 73.1
Show all
235.7266.4297.6175.7389.9050100150200250300350400
 
235.7266.4297.6175.7389.9050100150200250300350400

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 266.9
Samples: 108

Max RPKM: 430.5
Min RPKM: 115.2
Std RPKM: 53.4
Median RPKM: 266.4
GTEX-11H98-0011-R10b-SM-5NQ98 430.5
GTEX-13SLW-0011-R10a-SM-5S2UI 415.6
GTEX-12WSD-0011-R10b-SM-5GU79 389.9
GTEX-13O3O-0011-R10a-SM-5LUA9 375.4
GTEX-P44H-0011-R10A-SM-2XCEK 349.5
GTEX-145LU-0011-R10a-SM-5PNWJ 347.2
GTEX-13FHO-0011-R10b-SM-5J2MM 343.2
GTEX-14ASI-0011-R10b-SM-5S2VZ 342.0
GTEX-13SLX-0011-R10a-SM-5P9HV 333.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 333.1
GTEX-13RTJ-0011-R10b-SM-5O9CW 329.4
GTEX-13NYB-0011-R10a-SM-5KM43 325.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 319.9
GTEX-145MG-0011-R10a-SM-5PNWG 317.4
GTEX-13NYS-0011-R10a-SM-5MR4S 317.1
GTEX-QMR6-0011-R10A-SM-32PKO 314.5
GTEX-13FLV-0011-R10b-SM-5LZZ2 312.7
GTEX-QVUS-0011-R10A-SM-3GIK3 310.6
GTEX-147F4-0011-R10b-SM-5S2WC 310.5
GTEX-13QIC-0011-R10a-SM-5O9C7 309.9
GTEX-ZVT3-0011-R10b-SM-57WB6 309.4
GTEX-NPJ8-0011-R10A-SM-2YUMO 308.8
GTEX-14BIL-0011-R10a-SM-5SI75 306.6
GTEX-11WQC-0011-R10a-SM-57WCT 305.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 305.0
GTEX-13CZV-0011-R10b-SM-5LZYD 302.8
GTEX-QDT8-0011-R10A-SM-32PKG 298.9
GTEX-13X6I-0011-R10a-SM-5PNWI 297.2
GTEX-13OW7-0011-R10a-SM-5L3H3 295.7
GTEX-13FXS-0011-R10a-SM-5J2MA 295.6
GTEX-147GR-0011-R10b-SM-5S2UM 294.7
GTEX-13S7M-0011-R10b-SM-5PNZB 294.4
GTEX-13OW6-0011-R10a-SM-5L3HE 292.5
GTEX-13OVJ-0011-R10b-SM-5L3HT 292.1
GTEX-13O3Q-0011-R10b-SM-5KM39 289.2
GTEX-X4EP-0011-R10B-SM-4QASJ 289.1
GTEX-14BIN-0011-R10a-SM-5S2UA 288.9
GTEX-13OW8-0011-R10a-SM-5L3H6 287.3
GTEX-WWYW-0011-R10A-SM-3NB35 286.6
GTEX-13QJC-0011-R10a-SM-5SI63 284.2
GTEX-13X6K-0011-R10a-SM-5P9JR 283.5
GTEX-139TS-0011-R10a-SM-5K7TU 281.0
GTEX-131XH-0011-R10a-SM-5EGLJ 277.6
GTEX-TSE9-0011-R10A-SM-3DB7O 276.8
GTEX-12WSE-0011-R10b-SM-5P9JV 276.4
GTEX-XLM4-0011-R10A-SM-4AT5P 276.2
GTEX-13JUV-0011-R10b-SM-5LZXR 275.8
GTEX-12WSH-0011-R10a-SM-5LZUS 274.3
GTEX-RVPU-0011-R10A-SM-2XCAH 272.6
GTEX-132Q8-0011-R10b-SM-5DUWZ 272.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 271.9
GTEX-145LS-0011-R10a-SM-5PNUQ 268.5
GTEX-13FTZ-0011-R10b-SM-5KLZS 268.4
GTEX-T6MN-0011-R10A-SM-32QP7 266.4
GTEX-X4XX-0011-R10B-SM-46MWO 266.4
GTEX-1445S-0011-R10a-SM-5PNWB 266.0
GTEX-OXRN-0011-R10A-SM-2I5GC 265.2
GTEX-YJ89-0011-R10a-SM-4SOK9 261.9
GTEX-13N1W-0011-R10b-SM-5MR4H 260.7
GTEX-X585-0011-R10A-SM-46MUY 259.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 258.0
GTEX-X261-0011-R10B-SM-4E3JT 256.1
GTEX-13OVL-0011-R10a-SM-5L3GS 253.9
GTEX-WZTO-0011-R10B-SM-4E3KB 253.7
GTEX-11GSP-0011-R10a-SM-5NQ7J 250.4
GTEX-145MH-0011-R10b-SM-5PNUK 250.3
GTEX-13X6J-0011-R10b-SM-5PNWA 250.1
GTEX-N7MT-0011-R10A-SM-2I3E1 250.1
GTEX-Y8DK-0011-R10A-SM-4SOK1 249.4
GTEX-12WSF-0011-R10a-SM-5LZVH 249.1
GTEX-S7SE-0011-R10A-SM-2XCDF 248.1
GTEX-12WSC-0011-R10a-SM-5GU57 244.6
GTEX-12ZZZ-0011-R10a-SM-5P9HC 243.9
GTEX-N7MS-0011-R10A-SM-2HMJK 243.1
GTEX-ZUA1-0011-R10a-SM-51MT6 243.1
GTEX-T5JC-0011-R10A-SM-32PM2 241.3
GTEX-ZF28-0011-R10a-SM-4WWEH 240.4
GTEX-14753-0011-R10b-SM-5S2WE 237.4
GTEX-1477Z-0011-R10b-SM-5S2RF 237.4
GTEX-WVLH-0011-R10A-SM-3MJFM 237.2
GTEX-NL3H-0011-R10A-SM-2I3E9 235.8
GTEX-12126-0011-R10b-SM-5BC6T 235.4
GTEX-12WSM-0011-R10a-SM-5DUWV 234.0
GTEX-131XW-0011-R10a-SM-5DUVA 231.6
GTEX-QVJO-0011-R10A-SM-2S1QJ 230.4
GTEX-ZV68-0011-R10a-SM-51MT7 230.4
GTEX-12ZZW-0011-R10b-SM-5HL9X 229.2
GTEX-13FLW-0011-R10b-SM-5LZZF 228.2
GTEX-YFC4-0011-R10a-SM-4SOK5 227.5
GTEX-Z93S-0011-R10a-SM-4RGNM 225.5
GTEX-13G51-0011-R10b-SM-5LZYF 224.7
GTEX-11WQK-0011-R10a-SM-5BC6R 222.5
GTEX-1313W-0011-R10b-SM-5DUXA 221.5
GTEX-Q2AG-0011-R10A-SM-2HMLA 220.8
GTEX-OXRO-0011-R10A-SM-2I5EH 218.6
GTEX-131YS-0011-R10b-SM-5EQ5N 218.5
GTEX-ZDXO-0011-R10a-SM-4WWD8 218.2
GTEX-WL46-0011-R10A-SM-3MJFQ 207.0
GTEX-13JVG-0011-R10b-SM-5KM2P 203.8
GTEX-13NZA-0011-R10b-SM-5KM54 198.2
GTEX-NL4W-0011-R10A-SM-2I3DY 190.0
GTEX-ZXG5-0011-R10a-SM-57WDD 189.8
GTEX-13N2G-0011-R10a-SM-5MR34 177.1
GTEX-12WSA-0011-R10b-SM-5P9ET 175.7
GTEX-13IVO-0011-R10a-SM-5LZY3 142.8
GTEX-XMD1-0011-R10A-SM-4AT4A 140.5
GTEX-11ZUS-0011-R10b-SM-5BC79 116.0
GTEX-ZE7O-0011-R10a-SM-57WAZ 115.2
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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