Expression of RPUSD3 in cancer - Summary

CANCER ATLAS

Gene description

RNA pseudouridylate synthase domain containing 3

Protein class

Predicted intracellular proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA037551	HPA037552

GENE INFORMATION
Gene name	RPUSD3 (HGNC Symbol)
Synonyms	MGC29784
Description	RNA pseudouridylate synthase domain containing 3 (HGNC Symbol)
Entrez gene summary
Chromosome	3
Cytoband	p25.3
Chromosome location (bp)	9837849 - 9844602
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000156990 (version 83.38)
Entrez gene	285367
UniProt	Q6P087 (UniProt - Evidence at protein level)
neXtProt	NX_Q6P087
Antibodypedia	RPUSD3 antibodies

PROTEIN BROWSER

RPUSD3-001	RPUSD3-002	RPUSD3-004	RPUSD3-006	RPUSD3-009	RPUSD3-010	RPUSD3-011	RPUSD3-013

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
RPUSD3-001 ENSP00000373331 ENST00000383820	Q6P087 [Direct mapping] RNA pseudouridylate synthase domain-containing protein 3 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0001522 [pseudouridine synthesis] GO:0003723 [RNA binding] GO:0005515 [protein binding] GO:0005739 [mitochondrion] GO:0009451 [RNA modification] GO:0009982 [pseudouridine synthase activity] GO:0019239 [deaminase activity] GO:0031119 [tRNA pseudouridine synthesis] GO:0044822 [poly(A) RNA binding] Show all	351 aa 38.5 kDa	No	0
RPUSD3-002 ENSP00000398921 ENST00000433535	Q6P087 [Direct mapping] RNA pseudouridylate synthase domain-containing protein 3 Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0001522 [pseudouridine synthesis] GO:0003723 [RNA binding] GO:0005515 [protein binding] GO:0005739 [mitochondrion] GO:0009451 [RNA modification] GO:0009982 [pseudouridine synthase activity] GO:0019239 [deaminase activity] GO:0031119 [tRNA pseudouridine synthesis] GO:0044822 [poly(A) RNA binding] Show all	336 aa 36.9 kDa	No	0
RPUSD3-004 ENSP00000395446 ENST00000433972	H7C0K7 [Direct mapping] RNA pseudouridylate synthase domain-containing protein 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		151 aa 16.6 kDa	No	0
RPUSD3-006 ENSP00000405054 ENST00000423108	H7C2C3 [Direct mapping] RNA pseudouridylate synthase domain-containing protein 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0001522 [pseudouridine synthesis] GO:0003723 [RNA binding] GO:0009451 [RNA modification] GO:0009982 [pseudouridine synthase activity] Show all	144 aa 15.5 kDa	No	0
RPUSD3-009 ENSP00000400397 ENST00000427174	H7C1H7 [Direct mapping] RNA pseudouridylate synthase domain-containing protein 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0001522 [pseudouridine synthesis] GO:0003723 [RNA binding] GO:0009451 [RNA modification] GO:0009982 [pseudouridine synthase activity] Show all	280 aa 29.3 kDa	No	0
RPUSD3-010 ENSP00000408693 ENST00000424438	C9JM75 [Direct mapping] RNA pseudouridylate synthase domain-containing protein 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0001522 [pseudouridine synthesis] GO:0003723 [RNA binding] GO:0009451 [RNA modification] GO:0009982 [pseudouridine synthase activity] Show all	212 aa 22.6 kDa	No	0
RPUSD3-011 ENSP00000415616 ENST00000418713	H7C454 [Direct mapping] RNA pseudouridylate synthase domain-containing protein 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0001522 [pseudouridine synthesis] GO:0003723 [RNA binding] GO:0009451 [RNA modification] GO:0009982 [pseudouridine synthase activity] Show all	246 aa 26.4 kDa	No	0
RPUSD3-013 ENSP00000396405 ENST00000433555	H7C0R9 [Direct mapping] RNA pseudouridylate synthase domain-containing protein 3 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		102 aa 10.5 kDa	No	0