Expression of SUSD3 in cancer - Summary - The Human Protein Atlas

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SUSD3

TISSUE

CELL

CANCER

CANCER ATLAS

GENE/PROTEIN

Antibody validation

Dictionary


Level of antibody staining/expression
	High Medium Low Not detected

CANCER ATLAS

Gene description

Sushi domain containing 3

Protein class

Predicted membrane proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA042310

GENE INFORMATION
Gene name	SUSD3 (HGNC Symbol)
Synonyms	MGC26847
Description	Sushi domain containing 3 (HGNC Symbol)
Entrez gene summary
Chromosome	9
Cytoband	q22.31
Chromosome location (bp)	93058688 - 93085138
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000157303 (version 83.38)
Entrez gene	203328
UniProt	Q96L08 (UniProt - Evidence at transcript level)
neXtProt	NX_Q96L08
Antibodypedia	SUSD3 antibodies

PROTEIN BROWSER

SUSD3-001	SUSD3-002	SUSD3-003	SUSD3-201	SUSD3-202

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
SUSD3-001 ENSP00000364621 ENST00000375472	Q96L08 [Direct mapping] Sushi domain-containing protein 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Protein evidence (Kim et al 2014) Show all	GO:0005886 [plasma membrane] GO:0016021 [integral component of membrane] Show all	255 aa 27.1 kDa	No	1
SUSD3-002 ENSP00000474695 ENST00000471462	S4R3T3 [Direct mapping] Sushi domain-containing protein 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	119 aa 12.5 kDa	No	1
SUSD3-003 ENSP00000475051 ENST00000465709	S4R444 [Direct mapping] Sushi domain-containing protein 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	154 aa 16.6 kDa	No	1
SUSD3-201 ENSP00000364618 ENST00000375469	Q96L08 [Direct mapping] Sushi domain-containing protein 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0005886 [plasma membrane] GO:0016021 [integral component of membrane] Show all	242 aa 26 kDa	No	1
SUSD3-202 ENSP00000479555 ENST00000617293	A0A087WVN2 [Direct mapping] Sushi domain-containing protein 3 Show all	Predicted membrane proteins Prediction method-based Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SCAMPI predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins TMHMM predicted membrane proteins # TM segments-based 1TM proteins predicted by MDM Show all	GO:0016021 [integral component of membrane] Show all	211 aa 22.2 kDa	No	1

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.