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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:28.0TPM
GTEx:11.0RPKM
FANTOM5:100.9Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:Medium
Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Not detected
 

Antibody staining

Antibody HPA046598

  

Antibody CAB018377

  

Chondrocytes

 Low   Medium  

Adipocytes

 Low  

Fibroblasts

 Low  

Peripheral nerve

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA046598

  

Antibody CAB018377

  

Adipocytes

 Not detected   Low  

Fibroblasts

 Not detected   Low  

Peripheral nerve

 Not detected   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

28.0
N/A Female, age 80
Sample 1
TPM: 49.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 19.5
N/A Female, age 57
Sample 3
TPM: 21.0
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 28.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 21.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

11.0

GTEx sample id

RPKM
8.610.713.94.321.102468101214161820222426
 
8.610.713.94.321.102468101214161820222426

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 11.5
Samples: 350

Max RPKM: 27.1
Min RPKM: 4.3
Std RPKM: 3.9
Median RPKM: 10.7
GTEX-11WQC-2426-SM-5EQKQ 27.1
GTEX-13X6K-0226-SM-5QGPB 25.0
GTEX-Y111-0226-SM-4SOIW 24.5
GTEX-13112-2726-SM-5DUW5 24.1
GTEX-U412-0526-SM-3DB9I 22.3
GTEX-13OW8-1226-SM-5K7XD 22.2
GTEX-X8HC-0226-SM-4E3K1 21.9
GTEX-1269C-2726-SM-5EGJ4 21.1
Show all
7.69.812.52.919.00246810121416182022242628
 
7.69.812.52.919.00246810121416182022242628

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 10.4
Samples: 227

Max RPKM: 29.5
Min RPKM: 2.9
Std RPKM: 3.9
Median RPKM: 9.8
GTEX-ZTSS-1026-SM-5985N 29.5
GTEX-13JUV-0626-SM-5J1MQ 27.7
GTEX-14ICL-0926-SM-5S2TU 25.3
GTEX-ZXES-0926-SM-5E43O 20.6
GTEX-14A6H-1026-SM-5SIAZ 20.2
GTEX-11EM3-1126-SM-5A5KM 19.0
GTEX-ZE7O-1526-SM-5J1NH 18.6
GTEX-13S86-0926-SM-5SI6I 18.0
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

100.9

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 100.9
FF:10010-101C1 65,65,76 years, mixed 100.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.