Tissue expression of FAM213B - Summary - The Human Protein Atlas

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FAM213B

TISSUE

CELL

CANCER

TISSUE ATLAS PRIMARY DATA
MOUSE BRAIN

GENE/PROTEIN

Antibody validation

Dictionary


Tissue proteome

GENERAL INFORMATION
Gene name	FAM213B
Gene description	Family with sequence similarity 213, member B
Protein class	Enzymes Predicted intracellular proteins
Predicted localization	Intracellular
Number of transcripts	8
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HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:	Mixed
GTEx:	Mixed
FANTOM5:	Mixed

Protein evidence

Evidence at protein level

Protein expression

General cytoplasmic expression.

DATA RELIABILITY
Data reliability description	Pending external verification.
Reliability score	Approved based on 1 antibody. HPA006403
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RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM)

Protein expression (score)

Brain

Cerebral cortex

Hippocampus

N/A

Caudate

N/A

Cerebellum

N/A

Endocrine tissues

Thyroid gland

Parathyroid gland

Adrenal gland

Bone marrow & immune system

Appendix

Bone marrow

Lymph node

Tonsil

Spleen

Muscle tissues

Heart muscle

Skeletal muscle

Smooth muscle

Lung

Nasopharynx

N/A

Bronchus

N/A

Lung

Liver & gallbladder

Liver

Gallbladder

Pancreas

Pancreas

Gastrointestinal tract

Oral mucosa

N/A

Salivary gland

Esophagus

Stomach

Duodenum

Small intestine

Colon

Rectum

Kidney & urinary bladder

Kidney

Urinary bladder

Male tissues

Testis

Epididymis

Prostate

Seminal vesicle

Female tissues

Breast

Vagina

N/A

Cervix, uterine

Endometrium

Fallopian tube

Ovary

Placenta

Adipose & soft tissue

Adipose tissue

Soft tissue

N/A

Skin

Skin

Cerebral cortex

PROTEIN EXPRESSION OVERVIEW
Organ Expression Alphabetical

RNA EXPRESSION OVERVIEW
HPA dataset Organ Expression Alphabetical RNA tissue category: Mixed
GTEx dataset Organ Expression Alphabetical RNA tissue category: Mixed
FANTOM5 dataset Organ Expression Alphabetical RNA tissue category: Mixed

GENE INFORMATION
Gene name	FAM213B (HGNC Symbol)
Synonyms	C1orf93, MGC26818
Description	Family with sequence similarity 213, member B (HGNC Symbol)
Entrez gene summary
Chromosome	1
Cytoband	p36.32
Chromosome location (bp)	2586491 - 2591469
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000157870 (version 83.38)
Entrez gene	127281
UniProt	Q8TBF2 (UniProt - Evidence at transcript level)
neXtProt	NX_Q8TBF2
Antibodypedia	FAM213B antibodies

PROTEIN BROWSER

FAM213B-001	FAM213B-002	FAM213B-003	FAM213B-010	FAM213B-011	FAM213B-014	FAM213B-201	FAM213B-202

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
FAM213B-001 ENSP00000394405 ENST00000419916	Q8TBF2 [Direct mapping] Prostamide/prostaglandin F synthase Show all	Enzymes ENZYME proteins Oxidoreductases Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0001516 [prostaglandin biosynthetic process] GO:0005737 [cytoplasm] GO:0005783 [endoplasmic reticulum] GO:0005829 [cytosol] GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor] GO:0019369 [arachidonic acid metabolic process] GO:0019371 [cyclooxygenase pathway] GO:0043209 [myelin sheath] GO:0044281 [small molecule metabolic process] GO:0047017 [prostaglandin-F synthase activity] GO:0055114 [oxidation-reduction process] GO:0070062 [extracellular exosome] Show all	228 aa 24.3 kDa	No	0
FAM213B-002 ENSP00000367681 ENST00000378424	J3KPF5 [Direct mapping] Prostamide/prostaglandin F synthase Show all	SCAMPI predicted membrane proteins Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		231 aa 24.7 kDa	No	0
FAM213B-003 ENSP00000367684 ENST00000378427	J3KPF6 [Direct mapping] Prostamide/prostaglandin F synthase Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all		213 aa 22.4 kDa	No	0
FAM213B-010 ENSP00000463127 ENST00000498083	J3QKK8 [Direct mapping] Prostamide/prostaglandin F synthase Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		154 aa 16.5 kDa	No	0
FAM213B-011 ENSP00000462185 ENST00000465233	J3KRV9 [Direct mapping] Prostamide/prostaglandin F synthase Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		197 aa 20.9 kDa	No	0
FAM213B-014 ENSP00000443605 ENST00000537325	Q8TBF2 [Direct mapping] Prostamide/prostaglandin F synthase Show all	Enzymes ENZYME proteins Oxidoreductases Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0001516 [prostaglandin biosynthetic process] GO:0005737 [cytoplasm] GO:0005783 [endoplasmic reticulum] GO:0005829 [cytosol] GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor] GO:0019369 [arachidonic acid metabolic process] GO:0019371 [cyclooxygenase pathway] GO:0043209 [myelin sheath] GO:0044281 [small molecule metabolic process] GO:0047017 [prostaglandin-F synthase activity] GO:0055114 [oxidation-reduction process] GO:0070062 [extracellular exosome] Show all	191 aa 20.5 kDa	No	0
FAM213B-201 ENSP00000367682 ENST00000378425	A0A0A0MRV4 [Direct mapping] Prostamide/prostaglandin F synthase Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all		192 aa 20.7 kDa	No	0
FAM213B-202 ENSP00000413218 ENST00000444521	A0A0A0MT35 [Direct mapping] Prostamide/prostaglandin F synthase Show all	Predicted intracellular proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0001516 [prostaglandin biosynthetic process] GO:0005737 [cytoplasm] GO:0005783 [endoplasmic reticulum] GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor] GO:0043209 [myelin sheath] Show all	246 aa 26.4 kDa	No	0

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The Human Protein Atlas

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by the Knut & Alice Wallenberg foundation.