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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.8TPM
GTEx:19.3RPKM
FANTOM5:18.1Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Chondrocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA045194

  

Adipocytes

 Low  

Chondrocytes

 Medium  

Fibroblasts

 Medium  

Peripheral nerve

 Medium  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Not detected
 
 

Antibody staining

Antibody HPA045194

  

Adipocytes

 Not detected  

Fibroblasts

 Low  

Peripheral nerve

 Medium  
    
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

11.8
N/A Female, age 80
Sample 1
TPM: 7.7
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45
Sample 2
TPM: 4.8
N/A Female, age 57
Sample 3
TPM: 5.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74
Sample 4
TPM: 21.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59
Sample 5
TPM: 19.7
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

19.3

GTEx sample id

RPKM
 

Adipose - Subcutaneous
Adipose - Subcutaneous
RPKM: 19.5
Samples: 350

Max RPKM: 42.5
Min RPKM: 9.5
Std RPKM: 3.7
Median RPKM: 18.9
GTEX-QDT8-0226-SM-32PL4 42.5
GTEX-13NYS-0226-SM-5MR49 41.6
GTEX-13JVG-0226-SM-5J1MW 35.7
GTEX-111VG-2326-SM-5N9BK 30.4
GTEX-ZVZO-0226-SM-5A5LA 28.9
GTEX-R55F-1426-SM-2TF53 28.1
GTEX-13SLW-0226-SM-5S2NA 27.8
GTEX-13NZA-0126-SM-5K7UH 27.4
Show all
 

Adipose - Visceral (Omentum)
Adipose - Visceral (Omentum)
RPKM: 19.0
Samples: 227

Max RPKM: 30.8
Min RPKM: 11
Std RPKM: 3.5
Median RPKM: 18.7
GTEX-1128S-0926-SM-5GZZU 30.8
GTEX-13O3P-0926-SM-5IFFI 30.7
GTEX-14A6H-1026-SM-5SIAZ 29.9
GTEX-13FHO-2026-SM-5J1OA 29.6
GTEX-13X6I-1526-SM-5SIAC 28.3
GTEX-ZYW4-2226-SM-5GZYG 28.3
GTEX-117YW-0826-SM-5H11O 28.0
GTEX-13PVQ-2226-SM-5L3G9 27.7
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

18.1

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 18.1
FF:10010-101C1 65,65,76 years, mixed 18.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.