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In atlas

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Searches

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Detectable

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CTBP1
  • TISSUE

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TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

CTBP1

Gene description

C-terminal binding protein 1

Protein class

Plasma proteins
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

11
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Expressed in all
GTEx:Expressed in all
FANTOM5:Expressed in all

Protein evidence

Evidence at protein level

Protein expression

General nuclear expression.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data. Caution, targets protein from more than one gene.

Reliability score

Approved based on 3 antibodies.
HPA018987 , HPA044971 , CAB004217
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical
Cerebral cortexHippocampusCaudateCerebellumThyroid glandParathyroid glandAdrenal glandAppendixBone marrowLymph nodeTonsilSpleenHeart muscleSkeletal muscleSmooth muscleNasopharynxBronchusLungLiverGallbladderPancreasOral mucosaSalivary glandEsophagusStomachDuodenumSmall intestineColonRectumKidneyUrinary bladderTestisEpididymisProstateSeminal vesicleBreastVaginaCervix, uterineEndometriumFallopian tubeOvaryPlacentaAdipose tissueSoft tissueSkinNotdetectedLowMediumHighSCORE

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
Cerebral cortexThyroid glandParathyroid glandAdrenal glandAppendixBone marrowLymph nodeTonsilSpleenHeart muscleSkeletal muscleSmooth muscleLungLiverGallbladderPancreasSalivary glandEsophagusStomachDuodenumSmall intestineColonRectumKidneyUrinary bladderTestisEpididymisProstateSeminal vesicleBreastCervix, uterineEndometriumFallopian tubeOvaryPlacentaAdipose tissueSkin020406080100120140TPM
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
HypothalamusPituitary glandCerebral cortexHippocampusCaudateCerebellumThyroid glandAdrenal glandSpleenHeart muscleSkeletal muscleLungLiverPancreasSalivary glandEsophagusStomachSmall intestineColonKidneyUrinary bladderTestisProstateBreastVaginaCervix, uterineEndometriumFallopian tubeOvaryAdipose tissueSkin010203040RPKM
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Expressed in all
Pituitary glandBrainHippocampusCaudateCerebellumThyroid glandAppendixLymph nodeTonsilSpleenHeart muscleSkeletal muscleSmooth muscleLungLiverGallbladderPancreasSalivary glandEsophagusSmall intestineColonKidneyUrinary bladderTestisEpididymisProstateSeminal vesicleBreastVaginaCervix, uterineEndometriumOvaryPlacentaAdipose tissueRetina050100150200250Tags Per Million

GENE INFORMATION

Gene name

CTBP1 (HGNC Symbol)

Synonyms

BARS

Description

C-terminal binding protein 1 (HGNC Symbol)

Entrez gene summary

This gene encodes a protein that binds to the C-terminus of adenovirus E1A proteins. This phosphoprotein is a transcriptional repressor and may play a role during cellular proliferation. This protein and the product of a second closely related gene, CTBP2, can dimerize. Both proteins can also interact with a polycomb group protein complex which participates in regulation of gene expression during development. Alternative splicing of transcripts from this gene results in multiple transcript variants. [provided by RefSeq, Jul 2008]

Chromosome

4

Cytoband

p16.3

Chromosome location (bp)

1211448 - 1249953

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000159692 (version 83.38)

Entrez gene

1487

UniProt

Q13363 (UniProt - Evidence at protein level)

neXtProt

NX_Q13363

Antibodypedia

CTBP1 antibodies

PROTEIN BROWSER

«
CTBP1-001
CTBP1-002
CTBP1-003
CTBP1-005
CTBP1-006
CTBP1-008
CTBP1-010
CTBP1-013
CTBP1-015
CTBP1-017
CTBP1-201
»

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

CTBP1-001
ENSP00000290921
ENST00000290921
Q13363 [Direct mapping]
C-terminal-binding protein 1
X5D8Y5 [Target identity:100%; Query identity:100%]
C-terminal binding protein 1 isoform C
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122 [negative regulation of transcription from RNA polymerase II promoter]
GO:0001106 [RNA polymerase II transcription corepressor activity]
GO:0003700 [transcription factor activity, sequence-specific DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005667 [transcription factor complex]
GO:0005737 [cytoplasm]
GO:0006351 [transcription, DNA-templated]
GO:0006468 [protein phosphorylation]
GO:0008022 [protein C-terminus binding]
GO:0008134 [transcription factor binding]
GO:0008152 [metabolic process]
GO:0008285 [negative regulation of cell proliferation]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0017053 [transcriptional repressor complex]
GO:0019079 [viral genome replication]
GO:0019904 [protein domain specific binding]
GO:0031065 [positive regulation of histone deacetylation]
GO:0035067 [negative regulation of histone acetylation]
GO:0042803 [protein homodimerization activity]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0050872 [white fat cell differentiation]
GO:0051287 [NAD binding]
GO:0051726 [regulation of cell cycle]
GO:0055114 [oxidation-reduction process]
GO:0070404 [NADH binding]
GO:0070491 [repressing transcription factor binding]
GO:0090241 [negative regulation of histone H4 acetylation]
GO:1903758 [negative regulation of transcription from RNA polymerase II promoter by histone modification]
Show all
440 aa
47.5 kDa
No 0
CTBP1-002
ENSP00000420983
ENST00000513420
E9PGB1 [Direct mapping]
C-terminal-binding protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008152 [metabolic process]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
145 aa
15.9 kDa
No 0
CTBP1-003
ENSP00000372411
ENST00000382952
Q13363 [Direct mapping]
C-terminal-binding protein 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Plasma proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000122 [negative regulation of transcription from RNA polymerase II promoter]
GO:0001106 [RNA polymerase II transcription corepressor activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0006351 [transcription, DNA-templated]
GO:0006468 [protein phosphorylation]
GO:0008022 [protein C-terminus binding]
GO:0008134 [transcription factor binding]
GO:0008152 [metabolic process]
GO:0008285 [negative regulation of cell proliferation]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0017053 [transcriptional repressor complex]
GO:0019079 [viral genome replication]
GO:0019904 [protein domain specific binding]
GO:0031065 [positive regulation of histone deacetylation]
GO:0035067 [negative regulation of histone acetylation]
GO:0042803 [protein homodimerization activity]
GO:0045892 [negative regulation of transcription, DNA-templated]
GO:0050872 [white fat cell differentiation]
GO:0051287 [NAD binding]
GO:0051726 [regulation of cell cycle]
GO:0055114 [oxidation-reduction process]
GO:0070404 [NADH binding]
GO:0070491 [repressing transcription factor binding]
GO:0090241 [negative regulation of histone H4 acetylation]
GO:1903758 [negative regulation of transcription from RNA polymerase II promoter by histone modification]
Show all
429 aa
46.4 kDa
No 0
CTBP1-005
ENSP00000424684
ENST00000506180
D6RAX2 [Direct mapping]
C-terminal-binding protein 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008152 [metabolic process]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
187 aa
20.3 kDa
No 0
CTBP1-006
ENSP00000425053
ENST00000515399
E7ESU7 [Direct mapping]
C-terminal-binding protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008152 [metabolic process]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
171 aa
18.6 kDa
No 0
CTBP1-008
ENSP00000423872
ENST00000510568
E7EUB3 [Direct mapping]
C-terminal-binding protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
168 aa
18.1 kDa
No 0
CTBP1-010
ENSP00000422364
ENST00000504092
H0Y8W7 [Direct mapping]
C-terminal-binding protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008152 [metabolic process]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
287 aa
30.9 kDa
No 0
CTBP1-013
ENSP00000426470
ENST00000514210
E7EPF8 [Direct mapping]
C-terminal-binding protein 1
Show all
   MEMSAT3 predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008152 [metabolic process]
GO:0016616 [oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor]
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
202 aa
21.6 kDa
No 0
CTBP1-015
ENSP00000422148
ENST00000503594
H0Y8U5 [Direct mapping]
C-terminal-binding protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0051287 [NAD binding]
GO:0055114 [oxidation-reduction process]
Show all
184 aa
19.4 kDa
No 0
CTBP1-017
ENSP00000422730
ENST00000504784
H0Y913 [Direct mapping]
C-terminal-binding protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
24 aa
2.5 kDa
No 0
CTBP1-201
ENSP00000487417
ENST00000629223
A0A0D9SGE6 [Direct mapping]
C-terminal-binding protein 1
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
69 aa
7.5 kDa
No 0

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The Human Protein Atlas project is funded
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