Expression of C19orf47 in cancer - Summary

CANCER ATLAS

Gene description

Chromosome 19 open reading frame 47

Protein class

Predicted intracellular proteins, Predicted secreted proteins

Protein evidence

Evidence at protein level

Colorectal cancer

Breast cancer

Prostate cancer

Lung cancer

Liver cancer

STAINING SUMMARY

HPA041843	HPA046309

GENE INFORMATION
Gene name	C19orf47 (HGNC Symbol)
Synonyms	FLJ36888
Description	Chromosome 19 open reading frame 47 (HGNC Symbol)
Entrez gene summary
Chromosome	19
Cytoband	q13.2
Chromosome location (bp)	40319536 - 40348527
Protein evidence	Evidence at protein level (all genes)
Ensembl	ENSG00000160392 (version 83.38)
Entrez gene	126526
UniProt	Q8N9M1 (UniProt - Evidence at protein level)
neXtProt	NX_Q8N9M1
Antibodypedia	C19orf47 antibodies

PROTEIN BROWSER

C19orf47-001	C19orf47-002	C19orf47-005	C19orf47-006	C19orf47-008

PROTEIN INFORMATION
Splice variant	UniProt	Protein class	Gene ontology	Length & mass	Signal peptide (predicted)	Transmembrane regions (predicted)
C19orf47-001 ENSP00000463159 ENST00000582783	Q8N9M1 [Direct mapping] Uncharacterized protein C19orf47 Show all	Predicted secreted proteins Secreted proteins predicted by MDSEC SignalP predicted secreted proteins Phobius predicted secreted proteins SPOCTOPUS predicted secreted proteins Protein evidence (Kim et al 2014) Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005654 [nucleoplasm] Show all	422 aa 44.7 kDa	Yes	0
C19orf47-002 ENSP00000375889 ENST00000392035	Q8N9M1 [Direct mapping] Uncharacterized protein C19orf47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005515 [protein binding] GO:0005654 [nucleoplasm] Show all	355 aa 37.8 kDa	No	0
C19orf47-005 ENSP00000464478 ENST00000580606	J3QS16 [Direct mapping] Uncharacterized protein C19orf47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005654 [nucleoplasm] Show all	146 aa 15.7 kDa	No	0
C19orf47-006 ENSP00000463305 ENST00000582006	J3QKZ5 [Direct mapping] Uncharacterized protein C19orf47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all	GO:0005654 [nucleoplasm] Show all	142 aa 15.3 kDa	No	0
C19orf47-008 ENSP00000464567 ENST00000577617	J3QS80 [Direct mapping] Uncharacterized protein C19orf47 Show all	Predicted intracellular proteins Protein evidence (Ezkurdia et al 2014) Show all		168 aa 17.6 kDa	No	0