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Gene name

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External id

In atlas

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Reliability

Reliability

Validation

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Validation

Method

Validation

Method

Validation

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Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Tissue

Detectable

Cell line

Detectable

Category

Score

Score

Score

Antibodies

Column

 
 
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SHKBP1
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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:14.0TPM
GTEx:20.4RPKM
FANTOM5:21.4Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:Medium
 

Antibody staining

Antibody HPA041887

 

Glandular cells

Medium  
 
 
 

PROSTATE - HPA RNA-seq

Average TPM

14.0

overview Male, age 62
Sample 1
TPM: 13.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 19.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 23.2
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 18.0
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 12.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 16.0
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 15.8
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 11.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 9.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

20.4

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 20.4
Samples: 106

Max RPKM: 33.5
Min RPKM: 9
Std RPKM: 4.8
Median RPKM: 19.9
GTEX-111CU-1526-SM-5N9FS 33.5
GTEX-WFG8-1826-SM-4LVM4 33.0
GTEX-SNMC-0926-SM-4DM5U 32.9
GTEX-145LV-1226-SM-5S2QH 30.8
GTEX-S33H-1826-SM-4AD65 30.1
GTEX-XAJ8-0626-SM-47JY4 29.2
GTEX-11TT1-2026-SM-5EQM8 27.5
GTEX-S95S-1026-SM-4B64M 27.2
GTEX-ZTX8-1026-SM-5EGHD 27.0
GTEX-T8EM-1826-SM-4DM7F 26.4
GTEX-Q2AI-1126-SM-48U19 26.2
GTEX-XPVG-2026-SM-4B65E 26.1
GTEX-QLQ7-1326-SM-4R1JY 25.7
GTEX-13O61-1726-SM-5KM46 25.6
GTEX-QMRM-1426-SM-4R1K8 25.5
GTEX-UTHO-2726-SM-4JBH9 25.3
GTEX-139T6-1526-SM-5P9G6 24.9
GTEX-SJXC-2026-SM-4DM6N 24.8
GTEX-U4B1-1426-SM-4DXTX 24.8
GTEX-OIZH-2026-SM-3NB1M 24.6
GTEX-WFON-1626-SM-4LVMV 24.5
GTEX-XGQ4-1826-SM-4AT6F 24.5
GTEX-132NY-2826-SM-5P9G2 24.4
GTEX-ZZ64-0926-SM-5E44L 24.4
GTEX-QV44-1526-SM-4R1KI 24.3
GTEX-WH7G-1726-SM-4LVKY 24.3
GTEX-13G51-2326-SM-5LZXV 24.2
GTEX-NPJ8-2426-SM-3MJHL 24.0
GTEX-RM2N-1126-SM-48FCY 23.8
GTEX-S4Q7-1026-SM-4AD75 23.5
GTEX-13FXS-2826-SM-5LZYC 23.3
GTEX-13FTW-1226-SM-5LZZ1 23.1
GTEX-WZTO-0926-SM-4PQZ3 23.1
GTEX-V1D1-1926-SM-4JBGX 22.6
GTEX-XMK1-1026-SM-4B65H 22.4
GTEX-XQ3S-2526-SM-4BOOG 22.4
GTEX-ZTTD-2726-SM-57WFA 22.4
GTEX-V955-1826-SM-4JBIL 22.2
GTEX-ZY6K-1526-SM-5GZXE 22.1
GTEX-ZPU1-2026-SM-57WFI 22.0
GTEX-11NSD-0826-SM-5986S 21.7
GTEX-YB5E-1826-SM-5IFI4 21.3
GTEX-SNOS-1026-SM-4DM4Y 21.2
GTEX-11OF3-1726-SM-5GU5Q 20.9
GTEX-111FC-2026-SM-5GZYO 20.5
GTEX-VJYA-1226-SM-3GIJ6 20.5
GTEX-XOTO-2826-SM-4B65I 20.5
GTEX-11DYG-2526-SM-5N9BB 20.4
GTEX-YF7O-1926-SM-4W1YQ 20.2
GTEX-13OW8-0426-SM-5J2NR 20.0
GTEX-Y8E4-2126-SM-5RQHO 20.0
GTEX-132QS-1126-SM-5P9GC 19.9
GTEX-NFK9-2226-SM-3MJGP 19.9
GTEX-OOBJ-2026-SM-3NB1R 19.9
GTEX-RWSA-2026-SM-47JX8 19.8
GTEX-X5EB-1826-SM-4E3K8 19.6
GTEX-111YS-1726-SM-5GIED 19.4
GTEX-13N2G-1826-SM-5KM1I 19.3
GTEX-ZDYS-1226-SM-5IJF3 19.3
GTEX-1399T-1226-SM-5P9J5 19.1
GTEX-13O21-1126-SM-5N9EV 19.0
GTEX-14BMV-2326-SM-5RQJ4 18.9
GTEX-12ZZZ-2026-SM-5LZWJ 18.7
GTEX-11EQ9-1726-SM-5HL6U 18.5
GTEX-U3ZM-0926-SM-4DXSW 18.5
GTEX-11WQK-2726-SM-5EQMU 18.3
GTEX-1399R-0526-SM-5IJEF 18.3
GTEX-WFG7-1826-SM-3GIL1 18.1
GTEX-ZT9W-1626-SM-4YCDQ 17.9
GTEX-11TUW-2126-SM-5GU7B 17.8
GTEX-13NYS-1026-SM-5KLZT 17.8
GTEX-146FQ-1726-SM-5QGPX 17.7
GTEX-12C56-1326-SM-5FQSV 17.5
GTEX-14ABY-0726-SM-5Q5DF 17.4
GTEX-ZLFU-1726-SM-4WWBU 17.4
GTEX-12BJ1-1226-SM-5LUAE 17.3
GTEX-13111-1326-SM-5GCNO 16.9
GTEX-S3XE-1326-SM-4AD4H 16.9
GTEX-11P7K-0626-SM-5985Z 16.8
GTEX-QEG4-2226-SM-4R1JM 16.8
GTEX-14E6E-1126-SM-5S2R4 16.6
GTEX-ZVP2-0826-SM-59HJ6 16.6
GTEX-U8XE-2526-SM-4E3IT 16.5
GTEX-145LT-0626-SM-5O99E 16.4
GTEX-PLZ6-1126-SM-3P5ZR 16.2
GTEX-REY6-2126-SM-48FD9 16.2
GTEX-11O72-2726-SM-5HL6K 16.1
GTEX-OOBK-2025-SM-3LK5S 16.1
GTEX-QV31-1026-SM-4R1K3 16.1
GTEX-U412-2026-SM-4DXSI 16.1
GTEX-11ZUS-2126-SM-5N9E6 16.0
GTEX-131XF-1926-SM-5DUW4 15.5
GTEX-13RTJ-2126-SM-5S2PZ 15.5
GTEX-ZUA1-2826-SM-59HLE 15.2
GTEX-117YW-1426-SM-5EGGO 15.1
GTEX-YJ8A-1126-SM-5IFJU 15.1
GTEX-13FHO-2826-SM-5K7ZA 15.0
GTEX-WOFM-0326-SM-4OOSL 14.6
GTEX-144GM-0826-SM-5O98R 14.2
GTEX-WK11-2626-SM-4OOSK 14.1
GTEX-11P82-1126-SM-5BC5K 13.6
GTEX-117YX-1526-SM-5H12T 13.5
GTEX-Y9LG-1826-SM-4VBQC 12.1
GTEX-12696-2226-SM-5EQ65 10.5
GTEX-14C5O-2826-SM-5RQI6 10.3
GTEX-148VJ-1826-SM-5Q5DV 9.0
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

21.4

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 21.4
FF:10022-101D4 73,79,93 years, male 21.4

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