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TISSUE ATLAS PRIMARY DATA CAUDATE

GENE/PROTEIN

Antibody validation


Dictionary

Caudate

CAUDATE - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:29.2RPKM
FANTOM5:110.0Tags Per Million

CAUDATE - Annotated protein expression

Annotated protein
expression

Glial cells:Medium
Neuronal cells:High
 

Antibody staining

Antibody HPA003890

 

Antibody HPA051519

 

Antibody CAB056157

 

Glial cells

Medium   Medium   High  

Neuronal cells

High   Medium   High  
     
     
     

CAUDATE - HPA RNA-seq

Pending HPA RNA-seq analysis


CAUDATE - GTEx RNA-seq

Average RPKM

29.2

GTEx sample id

RPKM

 

Brain - Caudate (basal ganglia)

Brain - Caudate (basal ganglia)
RPKM: 29.2
Samples: 117

Max RPKM: 44.4
Min RPKM: 11.7
Std RPKM: 7.6
Median RPKM: 29.3
GTEX-13G51-0011-R5a-SM-5L3EB 44.4
GTEX-QVJO-0011-R5A-SM-2S1QM 43.1
GTEX-131YS-0011-R5b-SM-5K7YB 41.8
GTEX-UTHO-0011-R5A-SM-3GIJD 41.8
GTEX-N7MT-0011-R5a-SM-2I3G6 41.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40.7
GTEX-11GSP-0011-R5a-SM-57WBE 40.5
GTEX-WHSE-0011-R5A-SM-3P5ZO 40.2
GTEX-13OW6-0011-R5a-SM-5O9BK 39.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 39.7
GTEX-P44H-0011-R5A-SM-2XCEX 39.3
GTEX-T6MN-0011-R5A-SM-32QPD 39.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 38.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 38.2
GTEX-S7SE-0011-R5A-SM-2XCDA 38.0
GTEX-T2IS-0011-R5A-SM-32QP4 38.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 37.9
GTEX-14BIM-0011-R5b-SM-5S2RM 37.9
GTEX-N7MS-0011-R5a-SM-2HMK8 37.4
GTEX-WWYW-0011-R5A-SM-3NB3E 37.0
GTEX-R55E-0011-R5A-SM-2TC5N 36.6
GTEX-OHPN-0011-R5A-SM-2I5FF 36.5
GTEX-13X6I-0011-R5a-SM-5PNWW 36.3
GTEX-145LS-0011-R5a-SM-5SI65 36.0
GTEX-PVOW-0011-R5A-SM-32PL7 36.0
GTEX-XMD1-0011-R5A-SM-4AT47 35.6
GTEX-13X6K-0011-R5b-SM-5PNUE 35.3
GTEX-WVLH-0011-R5A-SM-3MJFW 35.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 35.2
GTEX-13FXS-0011-R5b-SM-5LZYE 35.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 34.8
GTEX-WZTO-0011-R5B-SM-3NMC5 34.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 34.6
GTEX-145MH-0011-R5a-SM-5P9JT 34.5
GTEX-12WSB-0011-R5b-SM-5GU67 34.1
GTEX-NL4W-0011-R5a-SM-2I3GD 34.1
GTEX-X585-0011-R5A-SM-46MVI 34.1
GTEX-12WSC-0011-R5b-SM-5CVNS 34.0
GTEX-132Q8-0011-R5a-SM-5IJDM 33.8
GTEX-13NYS-0011-R5a-SM-5MR4D 33.7
GTEX-13OVL-0011-R5b-SM-5L3FU 33.3
GTEX-13X6J-0011-R5b-SM-5PNWT 33.2
GTEX-1313W-0011-R5b-SM-5L3EP 33.0
GTEX-13SLX-0011-R5a-SM-5O9BV 32.5
GTEX-11H98-0011-R5b-SM-57WCF 32.3
GTEX-11OF3-0011-R5a-SM-57WB4 32.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 32.2
GTEX-13OW5-0011-R5b-SM-5L3FR 32.1
GTEX-13JUV-0011-R5a-SM-5LZY5 32.0
GTEX-1399T-0011-R5b-SM-5IJDK 31.9
GTEX-RU72-0011-R5A-SM-2TF6U 31.7
GTEX-14ABY-0011-R5b-SM-5SI7B 31.6
GTEX-X4XX-0011-R5A-SM-46MWN 31.3
GTEX-13VXU-0011-R5a-SM-5O9D7 31.0
GTEX-13O3O-0011-R5b-SM-5KM44 30.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 30.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 29.9
GTEX-ZUA1-0011-R5b-SM-51MTG 29.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 29.3
GTEX-T5JC-0011-R5A-SM-32PLK 29.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 28.8
GTEX-12WSD-0011-R5b-SM-5CVNG 28.7
GTEX-13S7M-0011-R5b-SM-5P9HS 28.6
GTEX-13OW7-0011-R5b-SM-5O9DM 28.4
GTEX-RVPV-0011-R5A-SM-2TF69 28.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 28.2
GTEX-WL46-0011-R5A-SM-3LK6V 28.2
GTEX-12WSF-0011-R5a-SM-5HL8K 27.8
GTEX-RVPU-0011-R5A-SM-2XCAD 27.8
GTEX-13JVG-0011-R5a-SM-5MR4O 27.5
GTEX-13NYB-0011-R5a-SM-5MR45 27.4
GTEX-13FLW-0011-R5a-SM-5LZX6 27.3
GTEX-11NV4-0011-R5a-SM-5NQ88 26.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 26.8
GTEX-NL3H-0011-R5a-SM-2I3GB 26.6
GTEX-13CZV-0011-R5a-SM-5K7XA 26.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 26.4
GTEX-144GO-0011-R5a-SM-5PNUR 26.4
GTEX-ZE7O-0011-R5a-SM-57WBO 26.4
GTEX-13OVH-0011-R5b-SM-5KM4L 26.3
GTEX-13FLV-0011-R5a-SM-5LZWT 25.9
GTEX-Z93S-0011-R5b-SM-4RGNI 25.9
GTEX-QMR6-0011-R5A-SM-32PKT 25.3
GTEX-YFC4-0011-R5a-SM-4RGLR 25.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 24.8
GTEX-139TT-0011-R5b-SM-5K7W8 24.5
GTEX-TSE9-0011-R5A-SM-3DB7J 23.8
GTEX-XOTO-0011-R5A-SM-4B657 23.1
GTEX-ZXG5-0011-R5b-SM-57WBN 23.1
GTEX-12ZZX-0011-R5a-SM-5HL89 22.7
GTEX-OXRN-0011-R5A-SM-2I5EF 22.5
GTEX-139TS-0011-R5b-SM-5J2MZ 22.4
GTEX-X261-0011-R5A-SM-3NMB4 22.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 22.1
GTEX-14BIN-0011-R5b-SM-5SI78 22.0
GTEX-1445S-0011-R5a-SM-5PNUS 21.9
GTEX-144GL-0011-R5b-SM-5PNUJ 21.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 21.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 21.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 20.9
GTEX-13FHP-0011-R5b-SM-5LZY2 20.5
GTEX-12WSA-0011-R5b-SM-5GU5I 19.8
GTEX-11WQC-0011-R5a-SM-5BC74 19.3
GTEX-ZVT3-0011-R5a-SM-51MSI 19.2
GTEX-13CIG-0011-R5b-SM-5L3F2 18.8
GTEX-NPJ7-0011-R5a-SM-33HBK 17.7
GTEX-ZV68-0011-R5a-SM-4YCDW 17.2
GTEX-13112-0011-R5b-SM-5DUV8 17.0
GTEX-11UD1-0011-R5b-SM-5P9FP 16.0
GTEX-YJ89-0011-R5a-SM-4V6GM 15.9
GTEX-1477Z-0011-R5b-SM-5PNUO 15.0
GTEX-S7PM-0011-R5A-SM-3NM8G 15.0
GTEX-12WSH-0011-R5b-SM-5P9F3 14.9
GTEX-13CF2-0011-R5a-SM-5LZWS 14.8
GTEX-139T8-0011-R5b-SM-5J1MO 14.3
GTEX-13NZA-0011-R5b-SM-5KM4K 11.9
GTEX-145MG-0011-R5b-SM-5S2VU 11.7
Show all

CAUDATE - FANTOM5 CAGE

Average Tags Per Million

110.0

FANTOM5 sample id

Sample description

Tags Per Million

Caudate nucleus
Tags Per Million: 110.0
FF:10164-103B2 76 years, female 123.8
FF:10379-105H1 89 years, female 96.2

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