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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:100.8TPM
GTEx:34.2RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Medium
Neuronal cells:High
Neuropil:Not detected
 

Antibody staining

Antibody HPA003890

 

Antibody HPA051519

 

Antibody CAB056157

 

Endothelial cells

Not detected   Low   Medium  

Glial cells

High   Low   High  

Neuronal cells

High   High   High  

Neuropil

Not detected   Not detected   Not detected  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

100.8

N/A Male, age 5
Sample 1
TPM: 96.6
overview Female, age 40
Sample 2
TPM: 92.5
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70
Sample 3
TPM: 113.2
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

34.2

GTEx sample id

RPKM

 

Brain - Cortex

Brain - Cortex
RPKM: 34.2
Samples: 114

Max RPKM: 75.3
Min RPKM: 21.5
Std RPKM: 6.9
Median RPKM: 34.4
GTEX-144FL-3026-SM-5O99C 75.3
GTEX-PVOW-2526-SM-2XCF7 45.2
GTEX-13FXS-3126-SM-5J2NN 44.7
GTEX-13NYS-3126-SM-5KLYV 43.9
GTEX-NPJ8-1526-SM-2D7VU 43.6
GTEX-14BMV-3026-SM-5S2PQ 43.0
GTEX-QMR6-1426-SM-32PLA 42.5
GTEX-13FHO-3026-SM-5J1O9 42.4
GTEX-ZUA1-3026-SM-59HJC 42.2
GTEX-RNOR-2326-SM-2TF4I 42.0
GTEX-UTHO-3026-SM-3GAFB 41.8
GTEX-13OW6-3026-SM-5J2MI 41.5
GTEX-14ASI-3026-SM-5S2PN 41.2
GTEX-13NYC-2826-SM-5K7WR 40.8
GTEX-111FC-3126-SM-5GZZ2 40.7
GTEX-WZTO-2926-SM-3NM9I 40.5
GTEX-T6MN-2626-SM-32PMQ 40.2
GTEX-QDT8-2926-SM-32PKC 40.1
GTEX-12ZZX-2926-SM-5GCOQ 39.8
GTEX-QVJO-1426-SM-2S1QY 39.8
GTEX-YFC4-3126-SM-5PNV6 39.5
GTEX-TSE9-3026-SM-3DB76 39.4
GTEX-11OF3-2926-SM-5HL78 39.3
GTEX-X4XX-3026-SM-3NMB2 39.2
GTEX-WWYW-3126-SM-3NB39 39.1
GTEX-WHSE-3026-SM-3P5ZH 39.0
GTEX-WVLH-3026-SM-3MJG9 39.0
GTEX-12ZZY-3026-SM-5GCOU 38.7
GTEX-T2IS-3026-SM-32QPM 38.6
GTEX-WL46-2926-SM-3LK82 38.5
GTEX-X585-3026-SM-46MWF 38.5
GTEX-11DXY-3226-SM-5GIDE 37.7
GTEX-13VXU-2926-SM-5LU5C 37.7
GTEX-132Q8-3026-SM-5PNVG 37.5
GTEX-13FHP-3026-SM-5IJBS 37.3
GTEX-ZAK1-3026-SM-5S2MJ 37.3
GTEX-11NUK-2926-SM-5A5MD 37.1
GTEX-144GL-3026-SM-5Q5CW 37.1
GTEX-XOTO-3026-SM-4B65M 37.1
GTEX-ZYFD-3026-SM-5E44C 37.0
GTEX-1313W-3126-SM-5LZUI 36.6
GTEX-Z93S-2926-SM-57WB9 36.5
GTEX-1192X-3126-SM-5N9BY 36.3
GTEX-145MF-2726-SM-5O995 36.3
GTEX-145MH-3026-SM-5Q5DZ 36.2
GTEX-T5JC-2426-SM-3NMDB 35.8
GTEX-XLM4-3026-SM-4AT6L 35.8
GTEX-13FLW-1426-SM-5K7YE 35.7
GTEX-12WSC-3026-SM-5GCNF 35.6
GTEX-11DXW-1126-SM-5H12Q 35.3
GTEX-12126-1026-SM-5P9JJ 35.1
GTEX-13O3Q-2926-SM-5KM45 35.1
GTEX-13OVH-3026-SM-5MR4N 35.1
GTEX-R55F-1326-SM-5S2V4 34.9
GTEX-11ZUS-2926-SM-5FQSL 34.7
GTEX-145LS-3126-SM-5Q5BY 34.5
GTEX-11GSO-2926-SM-5HL73 34.4
GTEX-QVUS-2826-SM-3GADB 34.3
GTEX-13OW8-2826-SM-5L3GC 34.2
GTEX-ZVT3-3026-SM-5E43N 34.2
GTEX-Q2AG-2926-SM-2HMJ3 34.0
GTEX-13SLX-3126-SM-5S2Q5 33.8
GTEX-11PRG-2926-SM-5987A 33.7
GTEX-OXRN-2426-SM-2I5EQ 33.7
GTEX-117XS-3026-SM-5N9CA 33.3
GTEX-13G51-3026-SM-5IJB8 33.3
GTEX-12ZZZ-3026-SM-5BC67 33.1
GTEX-11ONC-2926-SM-5P9JM 32.8
GTEX-NPJ7-2726-SM-2I3FT 32.7
GTEX-11WQK-3026-SM-5EQL6 32.6
GTEX-1128S-2726-SM-5H12C 32.4
GTEX-14A5I-2926-SM-5Q5CQ 32.0
GTEX-Y111-2726-SM-4TT3N 32.0
GTEX-1399T-3026-SM-5KLZC 31.6
GTEX-13NYB-3026-SM-5IJD7 31.5
GTEX-YJ89-3026-SM-5IFJI 30.9
GTEX-ZZPT-3026-SM-5GZXH 30.8
GTEX-13QIC-2926-SM-5J2NF 30.7
GTEX-13OVJ-2826-SM-5L3GW 30.5
GTEX-13X6K-2926-SM-5Q5D5 30.5
GTEX-145MG-3026-SM-5RQJA 30.4
GTEX-Y8DK-0826-SM-4TT3T 30.2
GTEX-11EI6-3026-SM-5GZZO 30.0
GTEX-131YS-3126-SM-5KLYT 30.0
GTEX-13O3O-3126-SM-5KM3H 30.0
GTEX-RU72-3026-SM-5SI7Y 29.8
GTEX-ZAJG-3126-SM-5HL9J 29.7
GTEX-11GS4-3126-SM-5A5LH 29.6
GTEX-13PL6-3126-SM-5LUAR 29.3
GTEX-11EMC-3226-SM-5EGKW 29.1
GTEX-N7MT-1126-SM-5SI7V 28.6
GTEX-13JUV-2926-SM-5LZX7 28.2
GTEX-12WSD-3126-SM-5HL7P 28.1
GTEX-12WSH-3026-SM-5CVNI 28.0
GTEX-13X6J-3026-SM-5Q5CU 27.7
GTEX-12ZZW-2926-SM-5LZUP 27.2
GTEX-11O72-2926-SM-5BC4V 26.8
GTEX-13S7M-3126-SM-5RQJQ 26.8
GTEX-13JVG-3126-SM-5L3FH 26.7
GTEX-1117F-3226-SM-5N9CT 25.6
GTEX-131XW-3126-SM-5LZUC 25.4
GTEX-139T8-1026-SM-5J2MC 25.4
GTEX-13IVO-2926-SM-5L3CZ 25.2
GTEX-13OW7-3026-SM-5L3GY 24.6
GTEX-11TTK-2926-SM-5PNYP 24.5
GTEX-13PVQ-3026-SM-5SI93 24.3
GTEX-PWO3-0926-SM-2I5EY 24.0
GTEX-11GSP-3226-SM-5986O 23.7
GTEX-11NV4-2126-SM-5N9DS 23.4
GTEX-1445S-3026-SM-5O9BR 23.2
GTEX-11OC5-0726-SM-5P9JK 23.1
GTEX-ZE7O-3126-SM-5HL5X 23.1
GTEX-147GR-3026-SM-5S2ML 23.0
GTEX-12WSA-2926-SM-5EQ4D 21.5
Show all
 

Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 34.2
Samples: 108

Max RPKM: 91.1
Min RPKM: 13.6
Std RPKM: 10.4
Median RPKM: 34.4
GTEX-X4EP-0011-R10B-SM-4QASJ 91.1
GTEX-QDT8-0011-R10A-SM-32PKG 53.4
GTEX-QVJO-0011-R10A-SM-2S1QJ 52.2
GTEX-Q2AG-0011-R10A-SM-2HMLA 51.3
GTEX-131XH-0011-R10a-SM-5EGLJ 50.7
GTEX-X585-0011-R10A-SM-46MUY 50.3
GTEX-WVLH-0011-R10A-SM-3MJFM 47.7
GTEX-NL3H-0011-R10A-SM-2I3E9 46.5
GTEX-S7SE-0011-R10A-SM-2XCDF 45.8
GTEX-WZTO-0011-R10B-SM-4E3KB 44.8
GTEX-145MH-0011-R10b-SM-5PNUK 44.7
GTEX-T6MN-0011-R10A-SM-32QP7 44.5
GTEX-13X6K-0011-R10a-SM-5P9JR 44.0
GTEX-WL46-0011-R10A-SM-3MJFQ 44.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 43.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 43.1
GTEX-X4XX-0011-R10B-SM-46MWO 42.8
GTEX-145MG-0011-R10a-SM-5PNWG 42.6
GTEX-12WSE-0011-R10b-SM-5P9JV 42.4
GTEX-12ZZX-0011-R10b-SM-5DUWK 42.4
GTEX-13N2G-0011-R10a-SM-5MR34 42.0
GTEX-13FHO-0011-R10b-SM-5J2MM 41.5
GTEX-YFC4-0011-R10a-SM-4SOK5 41.5
GTEX-XLM4-0011-R10A-SM-4AT5P 41.0
GTEX-132Q8-0011-R10b-SM-5DUWZ 40.6
GTEX-QMR6-0011-R10A-SM-32PKO 40.5
GTEX-ZF28-0011-R10a-SM-4WWEH 40.2
GTEX-13OVL-0011-R10a-SM-5L3GS 39.9
GTEX-12WSF-0011-R10a-SM-5LZVH 39.7
GTEX-13QIC-0011-R10a-SM-5O9C7 39.5
GTEX-14ASI-0011-R10b-SM-5S2VZ 39.1
GTEX-12WSM-0011-R10a-SM-5DUWV 39.0
GTEX-WWYW-0011-R10A-SM-3NB35 38.7
GTEX-13S7M-0011-R10b-SM-5PNZB 38.2
GTEX-13OW6-0011-R10a-SM-5L3HE 38.1
GTEX-YJ89-0011-R10a-SM-4SOK9 38.1
GTEX-13O3Q-0011-R10b-SM-5KM39 37.8
GTEX-N7MS-0011-R10A-SM-2HMJK 37.8
GTEX-Z93S-0011-R10a-SM-4RGNM 37.8
GTEX-131YS-0011-R10b-SM-5EQ5N 37.5
GTEX-13FLW-0011-R10b-SM-5LZZF 37.4
GTEX-1313W-0011-R10b-SM-5DUXA 37.3
GTEX-T5JC-0011-R10A-SM-32PM2 36.9
GTEX-Y8DK-0011-R10A-SM-4SOK1 36.2
GTEX-13X6J-0011-R10b-SM-5PNWA 35.9
GTEX-145LS-0011-R10a-SM-5PNUQ 35.9
GTEX-13CZV-0011-R10b-SM-5LZYD 35.8
GTEX-13RTJ-0011-R10b-SM-5O9CW 35.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC 34.9
GTEX-14BIL-0011-R10a-SM-5SI75 34.9
GTEX-QVUS-0011-R10A-SM-3GIK3 34.9
GTEX-N7MT-0011-R10A-SM-2I3E1 34.8
GTEX-11H98-0011-R10b-SM-5NQ98 34.5
GTEX-13N1W-0011-R10b-SM-5MR4H 34.5
GTEX-13FXS-0011-R10a-SM-5J2MA 34.4
GTEX-147GR-0011-R10b-SM-5S2UM 34.4
GTEX-13NYS-0011-R10a-SM-5MR4S 33.7
GTEX-13X6I-0011-R10a-SM-5PNWI 33.4
GTEX-ZVZQ-0011-R10b-SM-51MRT 33.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 33.3
GTEX-13G51-0011-R10b-SM-5LZYF 32.9
GTEX-P44H-0011-R10A-SM-2XCEK 32.5
GTEX-11ZUS-0011-R10b-SM-5BC79 32.2
GTEX-13QJC-0011-R10a-SM-5SI63 31.9
GTEX-12126-0011-R10b-SM-5BC6T 31.8
GTEX-13OVJ-0011-R10b-SM-5L3HT 31.8
GTEX-14BIN-0011-R10a-SM-5S2UA 31.5
GTEX-12WSC-0011-R10a-SM-5GU57 30.9
GTEX-147F4-0011-R10b-SM-5S2WC 30.9
GTEX-13NYB-0011-R10a-SM-5KM43 30.8
GTEX-13JUV-0011-R10b-SM-5LZXR 30.5
GTEX-TSE9-0011-R10A-SM-3DB7O 30.5
GTEX-12WSH-0011-R10a-SM-5LZUS 30.4
GTEX-13OW8-0011-R10a-SM-5L3H6 30.4
GTEX-13SLX-0011-R10a-SM-5P9HV 30.4
GTEX-OXRN-0011-R10A-SM-2I5GC 30.1
GTEX-ZDXO-0011-R10a-SM-4WWD8 30.1
GTEX-12ZZY-0011-R10b-SM-5HL7W 29.9
GTEX-13OW7-0011-R10a-SM-5L3H3 29.6
GTEX-13FLV-0011-R10b-SM-5LZZ2 29.2
GTEX-NL4W-0011-R10A-SM-2I3DY 29.0
GTEX-13O3O-0011-R10a-SM-5LUA9 28.0
GTEX-ZVT3-0011-R10b-SM-57WB6 27.9
GTEX-13SLW-0011-R10a-SM-5S2UI 27.8
GTEX-ZUA1-0011-R10a-SM-51MT6 27.5
GTEX-XMD1-0011-R10A-SM-4AT4A 27.0
GTEX-11WQK-0011-R10a-SM-5BC6R 26.9
GTEX-145LU-0011-R10a-SM-5PNWJ 26.9
GTEX-11WQC-0011-R10a-SM-57WCT 24.7
GTEX-RVPU-0011-R10A-SM-2XCAH 24.6
GTEX-11GSP-0011-R10a-SM-5NQ7J 24.0
GTEX-X261-0011-R10B-SM-4E3JT 23.6
GTEX-13FTZ-0011-R10b-SM-5KLZS 23.3
GTEX-1445S-0011-R10a-SM-5PNWB 22.0
GTEX-ZXG5-0011-R10a-SM-57WDD 21.3
GTEX-ZE7O-0011-R10a-SM-57WAZ 19.9
GTEX-13NZA-0011-R10b-SM-5KM54 19.5
GTEX-12ZZW-0011-R10b-SM-5HL9X 19.4
GTEX-13JVG-0011-R10b-SM-5KM2P 19.3
GTEX-12WSA-0011-R10b-SM-5P9ET 19.1
GTEX-1477Z-0011-R10b-SM-5S2RF 19.0
GTEX-OXRO-0011-R10A-SM-2I5EH 18.1
GTEX-139TS-0011-R10a-SM-5K7TU 17.7
GTEX-14753-0011-R10b-SM-5S2WE 17.3
GTEX-12WSD-0011-R10b-SM-5GU79 17.0
GTEX-13IVO-0011-R10a-SM-5LZY3 16.2
GTEX-ZV68-0011-R10a-SM-51MT7 13.7
GTEX-131XW-0011-R10a-SM-5DUVA 13.6
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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