Tissue expression of VPS28 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

Protein expression

RNA expression

HPA:	167.3	TPM
GTEx:	28.8	RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:	Low
Glial cells:	Medium
Neuronal cells:	High
Neuropil:	Low

Antibody staining	Antibody HPA024688	Antibody HPA024745
Endothelial cells	Low	Low
Glial cells	Low	Medium
Neuronal cells	Medium	High
Neuropil	Medium	Low

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	167.3

Male, age 5

Sample 1
TPM: 164.7

Female, age 40

Sample 2
TPM: 182.1

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 155.3

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	28.8

GTEx sample id

RPKM

Brain - Cortex

Brain - Cortex
RPKM: 31.3

Samples: 114

Max RPKM: 45.8
Min RPKM: 19
Std RPKM: 5
Median RPKM: 31.6

GTEX-11OF3-2926-SM-5HL78

45.8

GTEX-1192X-3126-SM-5N9BY

45.2

GTEX-13SLX-3126-SM-5S2Q5

43.7

GTEX-X585-3026-SM-46MWF

43.4

GTEX-145MG-3026-SM-5RQJA

39.8

GTEX-ZVT3-3026-SM-5E43N

39.1

GTEX-117XS-3026-SM-5N9CA

37.7

GTEX-1117F-3226-SM-5N9CT

37.3

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Brain - Frontal Cortex (BA9)

Brain - Frontal Cortex (BA9)
RPKM: 26.3

Samples: 108

Max RPKM: 47.4
Min RPKM: 13.8
Std RPKM: 5.5
Median RPKM: 26.4

GTEX-13SLX-0011-R10a-SM-5P9HV

47.4

GTEX-13NYS-0011-R10a-SM-5MR4S

41.9

GTEX-13RTJ-0011-R10b-SM-5O9CW

40.2

GTEX-13O3O-0011-R10a-SM-5LUA9

38.3

GTEX-N7MT-0011-R10A-SM-2I3E1

36.8

GTEX-13OW7-0011-R10a-SM-5L3H3

35.4

GTEX-12WSF-0011-R10a-SM-5LZVH

34.9

GTEX-14ASI-0011-R10b-SM-5S2VZ

34.7

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CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue