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Gene name

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VPS28
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    TISSUE

  • CELL

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TISSUE ATLAS PRIMARY DATA PROSTATE

GENE/PROTEIN

Antibody validation


Dictionary

Prostate

Tissue proteome

Prostate

PROSTATE - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:142.7TPM
GTEx:49.4RPKM
FANTOM5:62.9Tags Per Million

PROSTATE - Annotated protein expression

Annotated protein
expression

Glandular cells:High
 

Antibody staining

Antibody HPA024688

 

Antibody HPA024745

 

Glandular cells

High   High  
   
   
   

PROSTATE - HPA RNA-seq

Average TPM

142.7

overview Male, age 62
Sample 1
TPM: 134.3
Cell types%
Glandular cells: 30
Smooth muscle cells: 55
Skeletal muscle cells: 5
Other cell types: 10
N/A Male, age 65
Sample 2
TPM: 164.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 60
Other cell types: 20
overview Male, age 65
Sample 3
TPM: 189.6
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 68
Sample 4
TPM: 167.8
Cell types%
Glandular cells: 30
Smooth muscle cells: 65
Other cell types: 5
overview Male, age 60
Sample 5
TPM: 161.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 55
Other cell types: 5
overview Male, age 66
Sample 6
TPM: 146.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 45
Other cell types: 5
overview Male, age 63
Sample 7
TPM: 115.6
Cell types%
Glandular cells: 60
Smooth muscle cells: 35
Other cell types: 5
overview Male, age 66
Sample 8
TPM: 135.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 30
Other cell types: 5
overview Male, age 58
Sample 9
TPM: 94.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 50
Other cell types: 5

PROSTATE - GTEx RNA-seq

Average RPKM

49.4

GTEx sample id

RPKM

 

Prostate

Prostate
RPKM: 49.4
Samples: 106

Max RPKM: 92.1
Min RPKM: 27
Std RPKM: 12
Median RPKM: 48.5
GTEX-WZTO-0926-SM-4PQZ3 92.1
GTEX-111FC-2026-SM-5GZYO 79.4
GTEX-T8EM-1826-SM-4DM7F 74.9
GTEX-132NY-2826-SM-5P9G2 73.1
GTEX-ZUA1-2826-SM-59HLE 71.5
GTEX-V1D1-1926-SM-4JBGX 71.3
GTEX-14BMV-2326-SM-5RQJ4 67.1
GTEX-11NSD-0826-SM-5986S 65.9
GTEX-XQ3S-2526-SM-4BOOG 65.6
GTEX-13RTJ-2126-SM-5S2PZ 65.1
GTEX-11DYG-2526-SM-5N9BB 64.7
GTEX-RWSA-2026-SM-47JX8 64.4
GTEX-13FXS-2826-SM-5LZYC 64.2
GTEX-ZZ64-0926-SM-5E44L 63.1
GTEX-XOTO-2826-SM-4B65I 63.0
GTEX-13FHO-2826-SM-5K7ZA 62.8
GTEX-SNMC-0926-SM-4DM5U 62.6
GTEX-11OF3-1726-SM-5GU5Q 62.2
GTEX-145LV-1226-SM-5S2QH 62.2
GTEX-13G51-2326-SM-5LZXV 62.1
GTEX-U412-2026-SM-4DXSI 60.8
GTEX-UTHO-2726-SM-4JBH9 60.6
GTEX-146FQ-1726-SM-5QGPX 59.1
GTEX-V955-1826-SM-4JBIL 58.5
GTEX-NFK9-2226-SM-3MJGP 58.3
GTEX-QEG4-2226-SM-4R1JM 58.2
GTEX-OIZH-2026-SM-3NB1M 56.5
GTEX-11TUW-2126-SM-5GU7B 55.8
GTEX-QV44-1526-SM-4R1KI 54.6
GTEX-11ZUS-2126-SM-5N9E6 54.4
GTEX-ZY6K-1526-SM-5GZXE 54.1
GTEX-145LT-0626-SM-5O99E 53.6
GTEX-13OW8-0426-SM-5J2NR 53.5
GTEX-Y9LG-1826-SM-4VBQC 53.1
GTEX-1399T-1226-SM-5P9J5 53.0
GTEX-WFG8-1826-SM-4LVM4 53.0
GTEX-S4Q7-1026-SM-4AD75 52.6
GTEX-S95S-1026-SM-4B64M 52.2
GTEX-X5EB-1826-SM-4E3K8 52.0
GTEX-YF7O-1926-SM-4W1YQ 52.0
GTEX-PLZ6-1126-SM-3P5ZR 51.4
GTEX-111CU-1526-SM-5N9FS 51.2
GTEX-12ZZZ-2026-SM-5LZWJ 51.2
GTEX-QV31-1026-SM-4R1K3 51.2
GTEX-Y8E4-2126-SM-5RQHO 51.0
GTEX-139T6-1526-SM-5P9G6 50.4
GTEX-ZTTD-2726-SM-57WFA 50.1
GTEX-SJXC-2026-SM-4DM6N 49.8
GTEX-ZLFU-1726-SM-4WWBU 49.8
GTEX-14ABY-0726-SM-5Q5DF 49.3
GTEX-Q2AI-1126-SM-48U19 49.0
GTEX-QMRM-1426-SM-4R1K8 48.6
GTEX-WH7G-1726-SM-4LVKY 48.6
GTEX-WOFM-0326-SM-4OOSL 48.3
GTEX-13O21-1126-SM-5N9EV 48.1
GTEX-WFON-1626-SM-4LVMV 48.1
GTEX-1399R-0526-SM-5IJEF 47.3
GTEX-11O72-2726-SM-5HL6K 47.2
GTEX-REY6-2126-SM-48FD9 47.2
GTEX-12C56-1326-SM-5FQSV 47.1
GTEX-ZTX8-1026-SM-5EGHD 47.1
GTEX-NPJ8-2426-SM-3MJHL 47.0
GTEX-U4B1-1426-SM-4DXTX 46.9
GTEX-13N2G-1826-SM-5KM1I 46.6
GTEX-U3ZM-0926-SM-4DXSW 46.3
GTEX-S33H-1826-SM-4AD65 46.0
GTEX-117YW-1426-SM-5EGGO 45.5
GTEX-11WQK-2726-SM-5EQMU 45.3
GTEX-WK11-2626-SM-4OOSK 45.1
GTEX-144GM-0826-SM-5O98R 44.8
GTEX-13O61-1726-SM-5KM46 44.6
GTEX-XAJ8-0626-SM-47JY4 44.6
GTEX-11EQ9-1726-SM-5HL6U 43.4
GTEX-RM2N-1126-SM-48FCY 43.3
GTEX-XGQ4-1826-SM-4AT6F 43.2
GTEX-ZDYS-1226-SM-5IJF3 43.2
GTEX-13111-1326-SM-5GCNO 42.6
GTEX-QLQ7-1326-SM-4R1JY 42.5
GTEX-131XF-1926-SM-5DUW4 42.4
GTEX-148VJ-1826-SM-5Q5DV 42.4
GTEX-XMK1-1026-SM-4B65H 42.3
GTEX-YB5E-1826-SM-5IFI4 41.5
GTEX-13FTW-1226-SM-5LZZ1 39.9
GTEX-11P82-1126-SM-5BC5K 39.2
GTEX-111YS-1726-SM-5GIED 38.8
GTEX-13NYS-1026-SM-5KLZT 38.8
GTEX-117YX-1526-SM-5H12T 36.9
GTEX-11TT1-2026-SM-5EQM8 36.7
GTEX-ZT9W-1626-SM-4YCDQ 36.6
GTEX-132QS-1126-SM-5P9GC 36.4
GTEX-ZPU1-2026-SM-57WFI 35.4
GTEX-14C5O-2826-SM-5RQI6 35.2
GTEX-SNOS-1026-SM-4DM4Y 34.5
GTEX-YJ8A-1126-SM-5IFJU 34.4
GTEX-11P7K-0626-SM-5985Z 33.9
GTEX-XPVG-2026-SM-4B65E 33.2
GTEX-U8XE-2526-SM-4E3IT 32.9
GTEX-14E6E-1126-SM-5S2R4 32.4
GTEX-OOBK-2025-SM-3LK5S 32.2
GTEX-S3XE-1326-SM-4AD4H 31.7
GTEX-OOBJ-2026-SM-3NB1R 31.5
GTEX-12696-2226-SM-5EQ65 31.4
GTEX-WFG7-1826-SM-3GIL1 30.7
GTEX-ZVP2-0826-SM-59HJ6 29.3
GTEX-12BJ1-1226-SM-5LUAE 27.0
GTEX-VJYA-1226-SM-3GIJ6 27.0
Show all

PROSTATE - FANTOM5 CAGE

Average Tags Per Million

62.9

FANTOM5 sample id

Sample description

Tags Per Million

Prostate
Tags Per Million: 62.9
FF:10022-101D4 73,79,93 years, male 62.9

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