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Gene name

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In atlas

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Validation

Method

Validation

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Cell type

Expression

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Specificity

Tissue

Detectable

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Detectable

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Score

Score

Antibodies

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VPS28
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TISSUE ATLAS PRIMARY DATA TESTIS

GENE/PROTEIN

Antibody validation


Dictionary

Testis

Tissue proteome

Testis

TESTIS - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:169.4TPM
GTEx:51.5RPKM
FANTOM5:133.0Tags Per Million

TESTIS - Annotated protein expression

Annotated protein
expression

Cells in seminiferous ducts:High
Leydig cells:Not detected
 

Antibody staining

Antibody HPA024688

 

Antibody HPA024745

 

Cells in seminiferous ducts

Medium   High  

Leydig cells

Medium   Not detected  
   
   
   

TESTIS - HPA RNA-seq

Average TPM

169.4

overview Male, age 56
Sample 1
TPM: 146.4
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 2
TPM: 175.8
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25
overview Male, age 62
Sample 3
TPM: 259.6
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 34
Sample 4
TPM: 168.5
Cell types%
Cells in seminiferous ducts: 60
Other cell types: 40
overview Male, age 26
Sample 5
TPM: 206.8
Cell types%
Cells in seminiferous ducts: 55
Other cell types: 45
overview Male, age 50
Sample 6
TPM: 224.2
Cell types%
Cells in seminiferous ducts: 85
Other cell types: 15
overview Male, age 37
Sample 7
TPM: 192.0
Cell types%
Cells in seminiferous ducts: 35
Other cell types: 65
overview Male, age 51
Sample 8
TPM: 69.8
Cell types%
Cells in seminiferous ducts: 65
Other cell types: 35
overview Male, age 34
Sample 9
TPM: 144.8
Cell types%
Cells in seminiferous ducts: 70
Other cell types: 30
overview Male, age 26
Sample 10
TPM: 105.9
Cell types%
Cells in seminiferous ducts: 75
Other cell types: 25

TESTIS - GTEx RNA-seq

Average RPKM

51.5

GTEx sample id

RPKM

 

Testis

Testis
RPKM: 51.5
Samples: 172

Max RPKM: 76.3
Min RPKM: 30.6
Std RPKM: 8.3
Median RPKM: 51.4
GTEX-XQ3S-2726-SM-4BOP2 76.3
GTEX-X261-2326-SM-4PQYU 70.3
GTEX-13O1R-0726-SM-5IJEI 70.2
GTEX-11NV4-1726-SM-5N9FC 68.6
GTEX-13FHP-2826-SM-5IJFW 68.3
GTEX-UPJH-0126-SM-4IHLL 66.7
GTEX-WZTO-0326-SM-4PQYZ 66.6
GTEX-13NZA-2526-SM-5IJFX 66.4
GTEX-11LCK-2326-SM-5HL53 66.0
GTEX-R55E-0726-SM-48FCZ 65.9
GTEX-QEG4-0126-SM-48TZE 64.1
GTEX-111VG-1926-SM-5GIDO 64.0
GTEX-QLQW-1026-SM-447A9 64.0
GTEX-S7PM-0626-SM-4AD4Q 63.9
GTEX-13VXU-0726-SM-5J2O7 63.4
GTEX-N7MS-0126-SM-3TW8O 62.4
GTEX-13112-0226-SM-5P9IV 62.1
GTEX-ZT9X-1426-SM-5DUX1 62.1
GTEX-145MH-2326-SM-5O9AW 62.0
GTEX-14ABY-0626-SM-5Q5C9 62.0
GTEX-11TUW-2226-SM-5EQL9 61.8
GTEX-PW2O-1426-SM-48TCD 61.3
GTEX-WVLH-2626-SM-4MVNV 61.1
GTEX-V955-1926-SM-4KL1L 60.8
GTEX-WK11-0326-SM-4OOS6 60.0
GTEX-13N1W-2626-SM-5IJEP 59.6
GTEX-14753-0626-SM-5Q5CY 59.6
GTEX-QV31-1126-SM-4R1K4 59.3
GTEX-139TS-1726-SM-5IJG5 59.2
GTEX-XPT6-1626-SM-4B655 59.2
GTEX-RN64-2326-SM-48FDW 59.0
GTEX-Y5V6-1726-SM-4VDSZ 59.0
GTEX-XBEC-0126-SM-4GIDT 58.9
GTEX-YJ89-0626-SM-4TT3Z 58.7
GTEX-11NSD-1026-SM-5N9BE 58.6
GTEX-11NUK-2626-SM-5A5MB 58.3
GTEX-XLM4-1526-SM-4AT6D 58.3
GTEX-T5JC-0726-SM-4DM55 57.9
GTEX-S7SE-0326-SM-4AT5Q 57.8
GTEX-WH7G-1926-SM-4LVMM 57.6
GTEX-T8EM-0126-SM-4DM5R 57.3
GTEX-11ZUS-2726-SM-5FQUA 57.1
GTEX-S95S-1126-SM-4B64E 57.0
GTEX-Y111-2426-SM-4TT23 57.0
GTEX-111FC-1926-SM-5GZYC 56.6
GTEX-13FLW-2126-SM-5N9FD 56.6
GTEX-144GL-0726-SM-5LU4P 56.2
GTEX-13N2G-0126-SM-5N9DV 56.1
GTEX-OOBJ-2126-SM-3NB1N 56.0
GTEX-13OVH-0726-SM-5N9BU 55.8
GTEX-RM2N-1326-SM-48FCW 55.8
GTEX-12WSL-2326-SM-5DUXQ 55.7
GTEX-S3XE-1526-SM-4AD5A 55.6
GTEX-X3Y1-2626-SM-4PQZI 55.5
GTEX-OOBK-2126-SM-3LK5T 55.4
GTEX-YEC4-1526-SM-4W1YU 55.4
GTEX-SUCS-1326-SM-4DM5T 55.3
GTEX-U3ZH-1526-SM-4DXV1 55.3
GTEX-ZQUD-2026-SM-51MSM 55.3
GTEX-REY6-0126-SM-48FDT 55.2
GTEX-11GS4-2026-SM-5N9CP 55.0
GTEX-11WQC-2326-SM-5EQKE 54.6
GTEX-T6MN-2026-SM-4DM7L 54.5
GTEX-13NYB-2226-SM-5MR58 54.3
GTEX-144GM-0426-SM-5Q5C8 54.2
GTEX-Q2AH-1526-SM-48TZG 54.2
GTEX-TKQ1-0926-SM-4DXU2 54.2
GTEX-WOFM-1126-SM-4OOSB 54.1
GTEX-11OF3-1826-SM-5987N 54.0
GTEX-13OW5-2526-SM-5L3I1 53.7
GTEX-ZYFC-0126-SM-5GIEH 53.7
GTEX-ZYT6-2726-SM-5GICP 53.6
GTEX-13O21-1226-SM-5J2MK 53.1
GTEX-U8XE-0126-SM-4E3I3 53.1
GTEX-U8T8-1126-SM-4DXUE 52.7
GTEX-14A6H-2326-SM-5Q5B5 52.6
GTEX-NFK9-0126-SM-3LK5H 52.6
GTEX-12ZZY-0126-SM-5LZV2 52.5
GTEX-13OVL-0426-SM-5IFG6 52.5
GTEX-12696-0226-SM-5EGL3 52.4
GTEX-12WSI-2126-SM-5GCMV 52.4
GTEX-ZA64-1626-SM-5CVME 52.2
GTEX-13NZB-2026-SM-5MR4M 52.0
GTEX-13OW6-0126-SM-5IJGM 52.0
GTEX-ZDTT-2026-SM-5K7TY 51.5
GTEX-P4QS-2126-SM-3NMCF 51.4
GTEX-Z93S-1726-SM-5HL8G 51.4
GTEX-117YW-1526-SM-5EGGP 51.3
GTEX-11EQ8-1426-SM-5EGJR 50.9
GTEX-139TT-2226-SM-5LZWO 50.9
GTEX-145MO-0126-SM-5S2QU 50.9
GTEX-XBED-2026-SM-4AT5D 50.9
GTEX-SNMC-1026-SM-4DM7K 50.7
GTEX-ZVTK-0126-SM-57WDG 50.7
GTEX-11EI6-2226-SM-5EGJM 50.5
GTEX-131XE-0426-SM-5IJF4 50.5
GTEX-147F4-0626-SM-5LUAK 50.1
GTEX-11DXZ-2126-SM-59881 50.0
GTEX-11ONC-2226-SM-5HL6D 50.0
GTEX-YFCO-1726-SM-4W21S 49.8
GTEX-132QS-1226-SM-5P9GD 49.6
GTEX-1212Z-0326-SM-5FQSJ 49.4
GTEX-ZTSS-1526-SM-51MTC 49.1
GTEX-ZDYS-1326-SM-5IJFF 49.0
GTEX-VJYA-1426-SM-4KL1Y 48.9
GTEX-ZUA1-2726-SM-59HLJ 48.8
GTEX-11O72-0726-SM-5P9GO 48.4
GTEX-147JS-0126-SM-5S2TW 48.4
GTEX-Q2AI-1226-SM-48U14 48.2
GTEX-QEG5-0126-SM-4R1JR 48.2
GTEX-RWSA-2426-SM-47JXR 48.2
GTEX-13111-1526-SM-5EGJX 48.0
GTEX-ZV7C-2026-SM-5NQ8F 47.9
GTEX-R55C-1426-SM-48FED 47.7
GTEX-144GN-1626-SM-5Q5BU 47.5
GTEX-X5EB-2026-SM-4E3KA 47.5
GTEX-ZAB5-2426-SM-5CVMW 47.4
GTEX-V1D1-2126-SM-4JBH4 47.3
GTEX-117XS-2026-SM-5GID1 47.1
GTEX-13O61-2026-SM-5J2M6 47.1
GTEX-YF7O-2026-SM-4W1YE 47.1
GTEX-ZTX8-1126-SM-51MRM 47.1
GTEX-ZT9W-2226-SM-57WFU 46.9
GTEX-RUSQ-2126-SM-47JXK 46.8
GTEX-XPVG-2226-SM-4B65U 46.5
GTEX-U3ZM-1626-SM-4DXSK 46.1
GTEX-ZAB4-0126-SM-5CVMG 46.0
GTEX-12C56-1426-SM-5FQSW 45.8
GTEX-139T6-1226-SM-5IFFC 45.8
GTEX-TKQ2-1526-SM-4DXUN 45.8
GTEX-YEC3-1726-SM-5IFIK 45.4
GTEX-111YS-2026-SM-5EGGL 45.2
GTEX-R55D-0126-SM-48FEL 45.2
GTEX-S33H-0126-SM-4AD62 45.2
GTEX-12WSH-0326-SM-5GCNH 44.6
GTEX-111CU-1726-SM-5EGHM 44.4
GTEX-OHPM-2126-SM-3LK75 44.2
GTEX-QMRM-1526-SM-4R1K6 44.2
GTEX-1399Q-2826-SM-5IJEZ 44.0
GTEX-XGQ4-2026-SM-4AT6G 43.8
GTEX-OXRL-2126-SM-3NM98 43.7
GTEX-O5YT-2126-SM-3MJGD 43.6
GTEX-ZVZP-2226-SM-57WBF 43.6
GTEX-PLZ5-1526-SM-3P5ZX 43.5
GTEX-XMK1-2026-SM-4B65K 43.5
GTEX-SNOS-1126-SM-4DM67 43.2
GTEX-12WSM-1326-SM-5GCP9 43.0
GTEX-U4B1-1526-SM-4DXSL 43.0
GTEX-1399R-1626-SM-5P9GG 42.7
GTEX-OIZH-2126-SM-3NB1P 42.3
GTEX-ZZ64-1126-SM-5GZXY 42.2
GTEX-WFG8-1926-SM-4LVM1 42.1
GTEX-XAJ8-1326-SM-47JYT 41.9
GTEX-145LT-0426-SM-5LUAP 41.5
GTEX-P4QR-0226-SM-3NMCH 41.4
GTEX-Y8E4-2226-SM-5LU94 41.4
GTEX-QLQ7-1426-SM-4R1JX 40.6
GTEX-11EQ9-1926-SM-5PNVV 40.4
GTEX-QV44-1726-SM-4R1KG 40.1
GTEX-ZPU1-2126-SM-57WED 39.9
GTEX-YB5E-1926-SM-5IFIG 38.9
GTEX-11P82-1526-SM-5BC5M 38.8
GTEX-S4Q7-1226-SM-4AD5I 38.8
GTEX-Y9LG-1726-SM-4VBQE 38.8
GTEX-WFON-2026-SM-4LVMW 36.4
GTEX-WHSB-2126-SM-4M1XF 36.3
GTEX-OIZI-0126-SM-3NB13 35.6
GTEX-11P7K-1026-SM-5HL6Y 34.4
GTEX-1339X-1926-SM-5PNVP 34.0
GTEX-11WQK-2826-SM-5EQKH 32.9
GTEX-13FTW-1326-SM-5LZZD 32.5
GTEX-11TT1-2226-SM-5GU6B 30.6
Show all

TESTIS - FANTOM5 CAGE

Average Tags Per Million

133.0

FANTOM5 sample id

Sample description

Tags Per Million

Testis
Tags Per Million: 133.0
FF:10096-102C6 14-64 years, male 144.7
FF:10026-101D8 34,53,86 years, male 121.3

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